Caballeronia sp. NK8: NK8_66980
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Entry
NK8_66980 CDS
T09553
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
cabk
Caballeronia sp. NK8
Pathway
cabk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cabk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NK8_66980 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cabk03019
]
NK8_66980 (groL)
03110 Chaperones and folding catalysts [BR:
cabk03110
]
NK8_66980 (groL)
03029 Mitochondrial biogenesis [BR:
cabk03029
]
NK8_66980 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cabk04147
]
NK8_66980 (groL)
Enzymes [BR:
cabk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
NK8_66980 (groL)
Messenger RNA biogenesis [BR:
cabk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
NK8_66980 (groL)
Chaperones and folding catalysts [BR:
cabk03110
]
Heat shock proteins
HSP60 / Chaperonin
NK8_66980 (groL)
Mitochondrial biogenesis [BR:
cabk03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
NK8_66980 (groL)
Exosome [BR:
cabk04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
NK8_66980 (groL)
Exosomal proteins of other body fluids (saliva and urine)
NK8_66980 (groL)
Exosomal proteins of breast cancer cells
NK8_66980 (groL)
Exosomal proteins of colorectal cancer cells
NK8_66980 (groL)
Exosomal proteins of bladder cancer cells
NK8_66980 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
OB_DNA_ligase
Motif
Other DBs
NCBI-ProteinID:
BCQ28508
LinkDB
All DBs
Position
pNK82:complement(144828..146450)
Genome browser
AA seq
540 aa
AA seq
DB search
MSAKEVKFHDTARARIVKGVNVLADAVKVTLGPKGRNVLIERSFGAPTITKDGVSVAKEI
ELKDRFENMGAQIVKQVASKTGDVAGDGTTTATVLAQAIVQEGMKHVAAGMNPMDLKRGI
DKAVAALLDELRTLSKPISTSREIAQVGSISANADEAIGTIIAQAMEKVGKEGVITVEDG
KSLENELDVVEGMQFDRGYISPYFINDPDKQAAYLDDALILLHDKKISNIRDLLPVLEAT
SKAGKPLLIVAEDIEGEALATLVVNAMRGILKVAAVKAPGFGDRRKAMLEDIATLTGATV
ISEETGKQLQKAALEDLGRAKRIEVRKDDTIIIDGAGDEERIAARVKSIRAQIEETTSDY
DREKLQERVAKLAGGVAVIKVGAATEVEMKEKKDRVDDALHATRAAVEEGIVPGGGVALL
RAREAVTGLKGANSDQDAGIQIVLHALEAPLRIIAANAGDEPSVVIAKVVEGHGNFGYNA
ALGEYGDLVEAGVVDPTKVTRTALQNAASIAGLILTTDATVAEAPKDDKPTQTPAREFEY
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcaaaagaggtcaaattccacgacaccgcccgtgcccgcatcgtcaagggcgtc
aatgtgctggccgatgccgtgaaggttacccttgggcccaaaggccgaaacgtcctgatc
gaacgcagcttcggcgcgccgaccatcacgaaggatggggtgtcagtcgccaaggagatc
gaactcaaggaccgattcgagaatatgggagcacagatcgtcaagcaggtcgcttcgaag
acgggagacgtggccggcgacggcaccacgacggccaccgttctcgcacaagcgatcgtc
caggaaggcatgaaacatgtcgccgccggcatgaatccgatggatctcaagcgcggcatc
gacaaggccgtcgcggccttactcgacgagctgcgcacgctgtcgaagccgatttcgaca
agccgtgagattgcccaggtcggctcgatctccgcgaacgccgacgaggcgatcgggacg
atcatcgcacaggcgatggaaaaagtgggcaaggaaggcgtgattaccgtcgaagacggc
aagtcgctcgagaacgagttggatgttgtcgagggcatgcagttcgaccgtggctacatc
agcccctacttcattaacgatcccgacaagcaggctgcctatctcgacgatgcgctgatt
ttgctgcacgacaagaagatctcgaacatccgagatctgttgccagtgcttgaagcaacc
tcaaaggctgggaagccactgctgattgtcgctgaggacatcgagggcgaagcgctggcg
acattggtcgttaatgccatgcgcggcatcctcaaggtcgctgccgtcaaagcgccaggt
ttcggtgaccggcgcaaagccatgctcgaggacatcgcaaccctgacgggcgcgacggtc
atctccgaagaaaccggcaagcaactgcagaaggcagcccttgaagatctcggacgagcg
aagcgcattgaagtccgcaaggacgacacgatcatcatcgatggcgcgggcgacgaagag
cgcatcgcggcacgcgtgaagtccattcgtgcgcagatcgaggaaacgacaagcgactac
gaccgcgagaagctgcaggagcgtgtcgcgaaactcgccggcggcgtggccgtcatcaag
gtcggcgcggccaccgaggtcgaaatgaaggagaagaaagaccgcgtggacgacgcgctg
cacgctacacgtgccgcagtcgaggaaggcatcgtgcccggcggtggggtggcgctgctg
cgcgcgcgggaagcggtgacgggactgaaaggcgccaacagcgatcaggacgcgggcatt
cagatcgtactgcacgcgctcgaggcgccgctgcgcatcatcgccgcgaatgcgggcgac
gagccttcggtggtcatcgcaaaagtggtcgaaggccacggcaactttggctacaacgca
gccctcggcgaatacggcgatcttgttgaggcgggcgtcgtcgatccgaccaaggtcaca
cgtaccgcgctgcagaacgccgcatcgattgcggggttgattctcacaaccgatgccacc
gttgccgaagcgccgaaagacgataagccgacgcagacgcccgcacgggaattcgagtat
taa
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