Caballeronia sp. NK8: NK8_68040
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Entry
NK8_68040 CDS
T09553
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
cabk
Caballeronia sp. NK8
Brite
KEGG Orthology (KO) [BR:
cabk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cabk03032
]
NK8_68040
03036 Chromosome and associated proteins [BR:
cabk03036
]
NK8_68040
03400 DNA repair and recombination proteins [BR:
cabk03400
]
NK8_68040
DNA replication proteins [BR:
cabk03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
NK8_68040
Chromosome and associated proteins [BR:
cabk03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
NK8_68040
DNA repair and recombination proteins [BR:
cabk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
NK8_68040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
DUF2267
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
BCQ28614
LinkDB
All DBs
Position
pNK82:262929..263207
Genome browser
AA seq
92 aa
AA seq
DB search
MNKQELIDAVASESGTSKVAAEETINAVFETISKAVAAGDAVQLIGFGSFGTGERAARTG
RNPQTGETIEIAAAKTVKFTAGKGFKDAVNQA
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagcaggaactgatcgacgccgtggcgtcggagtcgggtacgagcaaggtcgcg
gcagaagagaccatcaatgccgtgtttgagacgatttcgaaagcagtggctgccggtgac
gccgttcagctgatcggcttcggatcgtttgggaccggcgagcgggccgcacgaacgggt
cgaaatccgcagaccggtgagacgatcgagatcgccgcagccaagaccgtcaaattcacg
gccggcaagggtttcaaagacgccgtcaaccaagcgtga
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