Caballeronia sp. NK8: NK8_77550
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Entry
NK8_77550 CDS
T09553
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K13641
IclR family transcriptional regulator, acetate operon repressor
Organism
cabk
Caballeronia sp. NK8
Brite
KEGG Orthology (KO) [BR:
cabk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cabk03000
]
NK8_77550
Transcription factors [BR:
cabk03000
]
Prokaryotic type
Helix-turn-helix
IclR family
NK8_77550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IclR_C
HTH_IclR
MarR_2
HTH_20
Dimerisation
SMC_Nse1
DUF742
HTH_24
TrmB
Motif
Other DBs
NCBI-ProteinID:
BCQ29565
LinkDB
All DBs
Position
pNK83:224317..225132
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AA seq
271 aa
AA seq
DB search
MAHIPAERCLDIIELLADGAVTMPLGEIATRLDLPKSGAHRLLATLVDLGWAEQDAETGF
YRLSMRLAILGQRFFVATGIPDICQPLVDRLAGQSREFVRLAVVDGSSLTWVAHAQGATG
GLLYQPTLGSNTVPLHATATGKAWLATLATEQAAENVLRVGFGDAEKYGPNVIRSLDALL
QEIEATRNRGYGIAMNEGEPGVSAIAAAIRPPSGGPALGVVSVAGPSARMTESRIAEMAP
LVTQAATELASFWPLRTRPSKLATASNMIAA
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atggctcatattcccgcagagcgctgccttgacatcatcgaattgctcgcggacggtgct
gttacgatgccgctcggtgagatcgcaacgcgactggatctgccgaagagtggtgcccat
cgattgctcgcgactctggtcgatctcggatgggccgaacaggacgcggagaccggtttt
tatcgactctcgatgcggctggccatcctggggcagcgatttttcgtcgccacgggcatc
ccggatatatgccagccgctggtcgatcgtctggcgggccagtcgcgcgagtttgtccga
ctggcggtggtcgacggatcgtcgttgacatgggtcgcgcatgcgcagggcgcaacgggc
gggctgctttatcaacccacgctgggaagcaacaccgttccgctgcacgcgacggccacg
ggcaaggcgtggctcgctaccttggccaccgaacaagcggcggagaacgtgttgcgtgtc
ggattcggcgatgccgagaagtacggtccgaacgtcatccgttcgctggacgcgcttctg
caagaaatcgaggcgaccaggaatcgcggatacggaatcgcgatgaacgaaggcgagccc
ggcgtgagcgcaatagcggcagccattcgtccaccgagcggcggcccggcgctgggcgtc
gtcagcgtggcggggccgagcgcgcgcatgacggaaagccgtatcgccgagatggcgccg
ttggtcacgcaggccgcgacggaactggcgtctttctggccgctgcgtacccgtcccagc
aagttggcgaccgcgagcaatatgatcgctgcgtga
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