Entry |
|
Name |
(GenBank) hemagglutinin repeat-containing protein
|
KO |
K15125 | filamentous hemagglutinin |
|
Organism |
cabk Caballeronia sp. NK8
|
Brite |
KEGG Orthology (KO) [BR:cabk00001]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:cabk00536]
NK8_79410
Glycosaminoglycan binding proteins [BR:cabk00536]
Heparan sulfate / Heparin
Microbial pathogens
NK8_79410
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
pNK83:complement(412878..422519)
|
AA seq |
3213 aa
MLLLGSASTLAFAQIVAAPGSGAQVIQTQNGLNQVNIARPSAAGVSVGTFSQFDVPKKGA
ILNNSPTIVQSQQGGYITGNPNLTPGNSARIIVNQVVSNSPSQLRGYLEVAGQKAEVVVA
NPNGIVLDGAGFLNTSKAVLTTGTPNYGPNGGLTGFNVSQGNITVQGAGLNATNVDQVDL
IARAIQVNAAIYANNLNVLAGPSAVDYATLATTPIAGTGAVPSVAIDVSQLGGMYSNRIF
LASNEYGVGVSTRGVLAAQAGDLTLKSNGQLVLAGTTQARGSISASGAQGIDNGGTTYAQ
HDVIVSTSGALTNSGTLAAQQNTSVNAASVSSTGTLGAGINQDGSVAQGGDLSVIALGAL
SANGRNAAGGNATISGASVNLAGSSTTANGNLAMAANAGDLNLSGATTTAGGAISVNAAS
TLTNDNGALKSGGAQSITAGALSNRNGQIISGGWLTANIVNAILNQGGTMQSAGALTVRA
ASVDNSAGHIASLNADGLSFTVSGLLNSAQGGAIGGNGDVTVQTGQLINAGSITAVQNLV
ATAAQTLANSGTLAANGNTTVTAGTTLTDAGGSISAGQRVTVQSATLDNSNGAITGDQLN
VAATNLINHNGTLTQTGTGATTLAVTGTLDNASGSIATNAADLTLTPAALVNDNGKVTSS
GTGTLSIDSGSISNKNGTIATNGALNANASGAISNQGGTMQAGGALNAFSASLDNSNGHI
TVLNGSSVSLATSGLLNNGANGQIASNGNVSVQAGQFVNAGSITAMQTLIARAVQSLFNS
GTLAANGKTTVSAGTTLTNSGTIAGNQLALSAYDLINRNGTITQTGTGATTFTVIGTLDN
SAGSITTNAADLSLTPAALLNDNGTITSSGTGTLSVQANSISNNGGTIATNGALDVKSGA
VSNQGGTLAAQTSATLDVASLDNRNGGYVGAQNVSITDAGALQNTGGTVQANGVMSVTAQ
DIANDNGSIANGGTGATTLTARGALSNTDNGLIGGNGDVSVSGASIDNSNGTLVAGGSIA
ANSGSTLANRAGLMQAGEDVSVSAVGAIDNTSGQIEADGATSALSMSGASIDNSNGRIAN
SGTGAMTVSADTVVNSNAGGVNGAGTVGGNGDVALDARVLSNANGAQVLAGHDLTLTIAQ
LADNTNATLSGANALTLNGPNASLLNAGGSVHANGAMNLNTASVDNTNGRIGNDQGSGGT
VSIATGALSNQNGAIGSDQNLSLATNTLTGDGRIIAGNDGAVTINGDYTLDGVNQIQANH
DLKFSTNGNFTNQGTLAAVNALTINANNVDNQASADLNSANTTVNAVEAIINEGRIEGDA
VATQSATLTNTGTIIGNVVTVDGTRSVVNTGAAAVMAAASELNVYSQGDIRNEQGANLFS
LGDINIAGDGMRDANGLLVNRANSVTNDQSTIEALGNIEVATNTLTNTRPAPTIETVTTD
VDTVHGTKRKKYIACNGGTSAGDPGGPTGSACNQALWDYGYKNPLNVSFSDADVVSSTSG
PDAVDRVLVVNIAGKPTTIYYNTLTQNADGTITVNYWDAYDPHINYDPSTEYLTRSDAHN
GWQRVEIARDTTTTTQKDQVTGSQAPQAQLLAGGTMTLANVGTINNAYSAIAAGDAIYIG
NAVQDGELDTSGNVGGTIVNNIGQTLYQYQRQDIASTYAWNEDITRDVGTITEPSIVLPP
VAIGGTGGTIVANNLVDINARDVNNVNVAAASSATGATGGTLGANTAMTSLSGGSGAGVK
DASGASVNGASGSATGAATGNGQTVNAPQSVAGPTGALNITLPTSGLYRYNRSPNAQYLI
ATDPRLTSYASFISSDYMLSALNLDPMKTEKRLGDGLYEQQLIRNQITQLTGRVYLEGPT
SNEDEYRALMGNGVSVAKEFNLAPGMALTAAQMNALTSDIVWLVEQVVTLPDGTTEHVLA
PVVYLAQAHANDLQPTGALIAADDVEIHTSGSVTNSGVIKGGTQTVITGTDILNRGGNIS
SDGTTAISASNDITNASGRISGNRVAVLAGHDIVNTTLVDAVGVRSAVGDSRVQQTLVGA
QGTIESTGDMVVAAGHDLTVHGANINAGGNAQITAGHDMLADTVQSTTSQSVTKNADHHW
EENTTLNQTSGISTGGSLAMQSGNDMTFKGAQVGAGQDMSVTAGGNLTATTVADSHKLDN
VNTDDRDKFIAHTYDEQTQGTSFTAGGSATLAALSADKNKGNVTLTGSSLSTDAGAANIV
ATGDVTLNEAREEHDDYSYRHSERGSSLRKTISDDMQTTQANIGAGSTVSGDSVNINAGH
DVTVQGSTVAGTNDVSVVAGNDLTITTSEDTNRSNEFHEKKVSGLGTAGVGISYGTNDTT
DTINDAAKSAQGSLIGSTTGNVTMQAGDMLHIKGSDVLAAGNVTGTGAEVVIEASQDDRH
HDETHETKSSGFTLAFKSSVIDAIQTAGQQARATENGTGNTRVDALHALAAGGSLVNGAN
PMMQGQAPDWKVELSFGSSSSKSTFSEDSTQHNGSNITAGGTTAFIAKGSGTAGSGNVTI
AGSNVNASDVVLAANNQVNLIHSTDTDSTRSNNESKSGSIGVSYGSQGYGISASGSRAHG
DANSDSAAQNNTHISGANSVSIVSGGDTNIKGATVDGGQVSTLVGGDLNIASVQDTSHSA
AHQESQSAGVSISQGGGSASYSQQKGDAHGDYVGIEEQSGIHAGAGGFDINVKGNTDLAG
AYISSDADASKNNLTTGTLSFSDIANASNYDAKSSGFSAGGSMGASSSAKANGVTAVSNG
GGVSPMISQHDSGNESATTKSAIGAGTITITDGANQKQDLASLNRDTSDLNGTVSKLPDL
QNLLNQQASTQQAAAIVAQTVATQIGNYADRQKKAAEASGDQATADKWAEGGEYRIAMHI
AGGAAVAGLGGGSVAGGAAGAGISAAAAGKLNELSDFIVASSPTGNADADRALGNIVANV
IAGGAGAVAGGNSGAMTAANADLYNRQLHPDEKKVIKNLANGDPDKEHRLEAAGCALVHC
AAEYSPSTADYMKYSGLEKEGAGYTAEQAQLQNYNGAFFSTAGAGGMVRQTPGSSLFQYT
SPDAKADSNAFTSNVLAQQPGKLDYLGVGGSALGMSGSVALNLHNGIYYLGGGGSVPISA
GVSITLGVIPASMGQLQSKQAEITDNFLNGGSFGGNGCAYGVCIGANHALGGDTSIEFGM
GLGGLTRSPNWGGGGGTGASVPAGVFPGMQPKR |
NT seq |
9642 nt +upstreamnt +downstreamnt
atgctcctgctcggatcggcttcgacgctcgcgttcgcacagatcgttgctgcgccgggt
tcaggcgcgcaggtcattcaaactcaaaatggtctgaatcaggtaaacatcgcgcgaccg
agcgcagcaggcgtatcggtcggaacgttctcccagttcgatgtacctaaaaaaggcgca
attcttaacaattcgccgacgatcgttcaaagtcagcagggcggatatataaccggtaat
ccgaatctcacgccgggtaattcggcgcggattatcgtcaatcaggttgtgagcaattcg
ccttcgcagttgcgcggctatctcgaagtggcaggccagaaagccgaggtagtggtcgcg
aaccccaacggcatcgtcttggatggcgctggcttcctgaatacgtcgaaggctgttctc
accactggcacgccgaactatggacccaacggcggtttgacgggcttcaatgtctcacag
ggcaacatcacggtccagggcgcaggactgaatgcgaccaacgtcgatcaggtcgacctg
attgctcgcgccattcaagtcaatgccgcaatctatgccaacaacctgaacgtgctggcc
ggaccgagcgcggtggattatgccaccctggccaccacaccgatagcgggcacgggcgcc
gtgccatccgttgcaattgacgttagtcaattgggcgggatgtatagcaatcgcattttt
ctggcgagcaacgagtatggggtgggggtcagtacgcgtggggtattggcggcccaggcg
ggcgacctgacgctcaagagtaacggccaactcgtgctcgccggaacgactcaggcgaga
ggttcgatcagcgccagcggcgcacagggcatagacaatggcggcacgacctacgcacag
cacgatgtgatcgtctccacgtcgggggcgttgaccaacagcggcacgctggcggcccag
cagaacacgagcgtcaatgcggcaagcgtgagctcgaccggcacgctgggcgcgggcatc
aatcaggatggctcggtcgctcaaggcggtgatctgtcggtgatcgccttgggcgcgtta
agcgctaacggacgcaatgcggcaggcggtaacgcgacgatttcgggtgcttcggtcaat
ctggcgggcagttcgaccacggccaacggcaacctcgcaatggctgccaatgcaggcgac
ctgaatctgtccggcgcgaccacgactgcaggcggcgcgatcagtgtcaacgctgcgagc
acgctcaccaacgacaatggcgcgctcaaatccggcggcgcgcaatcgatcaccgcaggc
gcattgtcgaaccgcaacgggcagatcatctcgggcggctggctgacggcgaacatcgtc
aatgcgatcctgaatcagggcggcacgatgcagtcggccggtgcgttgactgtgcgtgcg
gcaagcgtggataacagcgcaggccatatcgcgtcgttgaatgcggatggtttgagcttc
accgtctctggtcttctcaacagcgcgcagggcggcgcgatcggcggtaatggcgacgtg
accgtgcagaccggtcagctcatcaatgccggatcgatcacggccgtgcagaatctggtc
gcgacggcggcgcagacgctcgcgaactcgggtacgctcgccgcaaacggcaacacgacc
gtcacagcaggcacaacactgaccgacgcgggcggttcgatttccgcaggtcagcgcgtc
acggtccaatccgcgacgctcgacaatagcaatggcgcgatcacgggcgatcaactgaac
gtcgccgcaacgaacctcatcaaccacaacggcacgctcacgcaaaccggcacgggcgcg
accacgcttgcggtcaccggcacactcgataacgccagcggatcgatcgcaaccaacgcg
gcggatctgacgctcacgcctgccgcgttggtgaacgacaacggcaaggtcacgagttcg
ggcaccggtacgctctcgatcgacagtggatcgatctccaacaagaacggaacgatcgcg
acgaacggtgcattgaatgcgaacgcgagcggtgcgatttcgaatcagggcggcacgatg
caggcgggcggtgcgttgaatgcgttctccgcgagcctggacaactcgaacgggcacatc
acggttctgaacggcagcagtgtgtcgcttgcgacgagtgggctactcaataacggcgcg
aacgggcagatcgccagcaacggcaatgtgagcgtgcaggcgggccaattcgtcaacgcc
ggttcgatcaccgcgatgcaaaccctgatcgcgcgtgcggtgcaaagcttgttcaatagc
ggcacgctcgcggcgaacggcaagacgacggtgtccgctggcacgacgctcacgaactcc
ggcacgatcgcgggcaatcagttggcactgtccgcttacgacctgatcaaccgcaacggc
acgatcacacagacgggcacgggggcgacgacgttcaccgtcatcggcacgctggacaat
tcggcgggctcgatcacgaccaatgcggccgatctgtcgctgacgccggccgcgctgctg
aacgacaacggaaccatcacgagttcgggaaccggcacgctgtccgttcaggcgaattcg
atttccaataacggcggcacgatcgccaccaatggcgcgctcgatgtgaagagcggcgca
gtgtcgaatcagggcggcacgctcgccgcgcagacttccgctactctcgatgtcgcttcc
ctcgacaaccgcaacggcggctatgtcggcgcgcagaacgtgtcgattaccgacgcgggc
gcgttgcaaaacacgggcggcaccgtgcaggccaatggcgtgatgagcgttacggcgcag
gacatcgccaacgacaacggctcgatcgccaatggcggcaccggtgcgaccacgcttacg
gcgcgtggcgcattgagcaacaccgataacggtttgatcggcggcaacggcgatgtgtcg
gtgtcgggtgcgagcatcgacaattcgaatggcacgctggtggcgggcggttcgatcgcg
gcgaattctggcagcacgcttgccaaccgcgcgggtctcatgcaagcgggcgaggatgtg
tcggtgagcgcggtgggcgccatcgataacacgagcggtcagatcgaagcggacggcgca
acgtccgcgctctcgatgtcgggtgcatcgatcgataattcgaacggacgcatcgcgaac
agcggaacgggcgcgatgacggtcagcgccgacacggtcgtcaacagcaatgccggcggc
gtgaacggtgcgggcacggttggcggcaatggcgatgtggctctcgatgcgcgggtgctg
tcgaacgccaacggcgcgcaggtgctcgcgggacacgatctgacgctgaccatcgcgcaa
ctcgcggacaacaccaacgccacgctctccggcgcgaacgcgctgacgctcaacgggcct
aatgcgtccttgttgaacgcgggcggctccgttcatgcgaacggtgcgatgaacctgaac
acggcttcggtcgataacaccaatggccgcattggcaacgatcaaggcagcggcgggacc
gtatcgattgcgaccggcgcgctctcgaaccagaacggcgcgatcggcagcgaccagaac
cttagtcttgcgacgaacacgcttacgggcgatggccgcatcatcgcgggcaacgacggc
gcggtgaccatcaatggcgattacacgctcgacggcgtgaatcagattcaggccaatcat
gatctgaagttctcgacgaacggcaacttcaccaatcagggcacgctcgcggcggtgaac
gcactgacgatcaacgcgaacaacgtcgacaatcaggcgagcgcggacctcaattccgcg
aacacgacggtgaatgccgtcgaagcaatcatcaacgaaggccgtatcgaaggcgatgcg
gtggcgacgcaaagcgcgacgctcacgaacaccgggacgatcatcggcaatgtggtgacg
gtcgacggaacgcggtcggtggtgaacacaggtgcagcggcagtgatggcggcggcctcg
gaactgaacgtctattcgcaaggcgatatccgcaacgaacaaggcgcgaacctgttcagc
cttggcgatatcaacatcgcgggcgacggcatgcgcgatgcgaatggcctgctcgtgaat
cgcgcgaattcggtgaccaacgatcagtcgacgatcgaggcgctgggtaatatcgaagtg
gcgacgaatacgctgacgaacacgcgccccgcgccgacgatcgagacggtaacgacggat
gtcgatacggttcatgggaccaagcgcaagaaatacattgcatgtaacggaggcacgagt
gcaggcgaccccggcggccccaccggttccgcctgtaaccaggccttgtgggactatggc
tacaagaatccgttgaacgtgagtttcagcgacgctgatgttgtgtcgagcacgagcgga
cctgatgcagtcgatcgcgtgttggtggtgaacatcgccggcaaaccgacgacgatctac
tacaacacgctcacgcaaaacgccgacggcacgatcacggtcaactactgggacgcctac
gatccgcatatcaactatgatccgtccaccgaatatctgacccgtagcgatgcacacaac
ggctggcagcgcgtggaaatcgcgcgcgacacgaccacgacgacgcagaaggatcaggtg
acgggctcgcaagcgccgcaagctcaactgctcgccggcggcacgatgacgctcgccaac
gtcggcacgatcaacaatgcatacagcgcgatcgctgcgggcgatgcgatctacatcggc
aatgcggtgcaagacggtgaactcgatacgagcggcaacgttggcggcacgatcgtgaac
aacattggccagacgttgtatcaataccagcgacaggatatcgcctcgacgtatgcgtgg
aatgaagacatcacgcgtgacgtaggcactatcacggagccgtccatcgtgctgccgccg
gtggccatcggcggcacgggcggcacaatcgtcgccaacaacttggtcgatatcaacgcg
cgcgacgtgaacaacgtaaatgtcgcggcagcaagctctgccacgggcgcaacgggcggc
acgcttggcgcgaataccgcgatgacgtccttatcgggcggcagcggcgcgggcgtgaaa
gacgcgagcggcgcctcggtgaatggcgcaagcggctccgcgacaggcgctgccacgggc
aatggtcagacggtcaacgcgccacaatcggtcgcgggtccgaccggcgcactaaacatc
accctgccgacgagcggcctgtatcgctacaacaggtcaccgaacgcgcagtacctgatc
gcgaccgatccgcgcctgacgagctacgcgagcttcatctccagcgactacatgctcagc
gcgctcaacctcgatccgatgaagaccgagaagcgcctgggcgatggcctgtacgagcag
caactcattcgcaatcagatcacgcagcttacgggccgcgtgtatctggaaggccctacg
agcaacgaggatgaatatcgcgcgttgatgggcaacggcgtgagcgtcgcgaaggaattc
aacctcgcgccgggcatggcgctgacggctgcgcaaatgaatgcgctcacgagcgacatc
gtgtggctggtggaacaggtcgtgactttgcccgatggaacgacggagcacgtgctcgcg
ccggtggtgtatctggcgcaagcgcacgcgaatgatcttcagccgaccggcgcattgatc
gcggcggacgacgtggagattcacacgtcgggcagtgtcacgaacagcggcgtgatcaag
ggcggcacgcagacggtcatcaccggcacggacattctgaaccgtggcggaaacatcagc
agcgatggcacgacggcgatatcggcgagcaacgacatcacgaacgcctcgggtcgtatc
tcgggaaatcgcgtggcggtgctggcgggccacgatatcgtcaacactacgttggtcgat
gcagtgggcgtgagatcggcggtgggcgacagccgggttcagcagacgctggtcggcgcg
caaggcacgatcgaatcgacgggcgacatggtggtcgctgccggtcacgatctgacggta
cacggcgcgaacatcaacgcgggtggcaatgcgcagatcacggccggccacgacatgctc
gcggataccgtccagtcgacgacatcgcaatcggtgacgaagaacgccgatcaccattgg
gaagagaacacgacgctcaaccagacgagcggcatcagcacgggtggcagtctcgcgatg
cagtcgggcaacgacatgaccttcaagggcgcgcaggtgggcgcgggccaggatatgtcg
gtcacggcgggcggcaatctgacggcgacgacggtcgccgacagccacaagctggataac
gtcaacacggatgatcgggacaagttcatcgcgcatacctacgatgaacagacacagggc
acaagcttcacagcgggaggcagcgcgacgctggcggcgttgagcgcggacaagaacaag
ggtaatgtgacgctcacgggctcgagcctgagcaccgatgcgggcgcggcgaatatcgtt
gcaacgggcgatgtgacgctcaacgaagcgcgcgaggagcacgacgattactcgtaccgg
cattcggagcgcggcagctcactgcgcaagacgatctcggacgacatgcagaccacgcag
gcgaacatcggcgcgggcagcacggtgtcgggcgattcggtgaacatcaacgcgggtcat
gatgtgacggtccagggttcgacagtcgcggggacgaacgacgtaagcgtcgtcgcaggc
aatgacctgacgatcaccacgtcggaggatacgaaccgttcgaatgagttccacgaaaag
aaggtgagcggcctcggcacggcgggcgtgggaatttcgtatggcacgaacgacaccacg
gacacgatcaacgatgcggccaaatccgcgcaaggcagtctgatcggcagcacgacgggc
aacgtgacgatgcaggcgggcgacatgctgcatatcaagggctcggacgtgctcgcagcg
ggcaacgtaacgggtacgggggcggaagtcgtcatcgaagcgtcgcaagacgatcgccat
cacgatgagacccatgagacgaagagttcgggcttcacgctcgcattcaagtcatcggtg
atcgatgccattcaaacggcgggtcagcaagcgcgagcgacggagaatggcacgggcaac
acgcgcgtcgacgcgttgcacgcgctggctgcgggcggcagcctcgtcaacggtgcgaat
ccgatgatgcagggtcaggcgccggactggaaggtcgaactgagcttcggctcatcgagc
agcaagtcaaccttcagcgaggacagcacgcagcacaacggctcgaacatcacggcgggc
ggcacgacggcgttcatcgcgaagggcagcggcacggcgggcagcggcaacgtgacgatc
gccggctcgaacgtgaacgcaagcgatgtggtgctggcggcgaacaatcaggtgaacctg
attcattcgacggatacggacagtacgcgcagcaacaacgaatcgaagagcggcagtatc
ggggtgtcgtatggctcgcagggatacgggatctcggcctcgggcagccgcgcgcatggc
gatgcgaattcggattcggcggcgcagaacaacacgcacatcagcggcgcgaatagtgta
agcatcgtgtcgggcggcgatacgaacatcaagggtgcgacggtcgatggcgggcaggtg
tcgacgctcgttggtggtgatctgaacatcgcgagcgtgcaggacacgagccatagcgcg
gcgcatcaggagagccagagcgcgggtgtcagcatcagccagggcggaggtagcgcgagc
tacagccagcagaagggtgacgcgcacggtgattacgtgggcatcgaagagcagtcgggg
attcatgccggtgcgggcgggttcgatatcaatgtgaagggcaataccgatctggcaggt
gcgtatatctcgagcgatgcagacgcgtcgaaaaacaacctcacgacgggcacgttgagc
ttcagcgatatcgcgaatgcgtcgaactacgacgcgaagagcagcgggttcagcgcgggc
gggtcgatgggtgcgtcgagcagcgcgaaggccaatggtgtgacggcggtgtccaacggt
ggtggcgtctcgccgatgatctcgcagcacgacagcggcaatgagagtgcgacgacgaag
agcgcgatcggtgcgggtacgatcacgatcacggatggcgcgaatcagaagcaggacttg
gcgagcctgaatcgtgatacgagcgatctgaacgggacggtaagcaagctgcccgacttg
cagaatctgctcaatcagcaggcgagcacgcagcaggcggcggcgatcgttgcgcagacg
gtggccacgcagatcgggaactatgcggatcggcagaagaaggcggccgaagcgtcgggc
gatcaggcaactgcagacaagtgggccgaaggaggggagtatcggatcgcgatgcatatt
gcgggcggtgcggcggtcgcgggtctcggtgggggcagtgtcgcgggcggggctgcgggt
gcgggcatctcggcggcggcggcaggcaagctcaacgaactgagtgatttcattgttgca
tcgagtccgacgggcaatgcggatgcggatcgagcgttgggcaatattgttgcgaatgta
attgctggtggagcgggcgcggtcgcgggtggcaattcgggcgcgatgacggctgcgaat
gctgatctttacaatcggcagttgcatccggatgagaagaaggtcatcaaaaaccttgcc
aacggagaccccgacaaagaacaccgactagaagcggcgggctgcgctcttgttcactgc
gcggcggaatattcaccgagcacggctgattacatgaagtattcggggctggaaaaggaa
ggcgcgggctatacggccgaacaagcacaattgcagaactacaatggggcgttcttctcg
acggctggcgctggcggtatggtgcggcagacgccgggcagcagtttattccagtacaca
tcgccagatgcaaaggcggacagcaacgcctttacttcgaatgtattggctcaacagcct
ggaaaacttgactatttaggtgttggtggtagcgcattggggatgtctggtagtgttgcg
ttgaatttgcataacggaatttattatttgggaggcggcggttcggttcctatctcggct
ggtgtatcgataaccctgggtgtaattcctgcatctatggggcaattgcagtcgaaacag
gcggaaatcacagataactttctgaacggtggatcattcggtggaaatggttgtgcttat
ggcgtgtgtatcggagcgaatcacgcgctaggtggcgatacatccatcgagtttggaatg
ggattaggaggattgactagatcacctaattggggtgggggtggtggaaccggtgcaagt
gttccggctggagtgtttccgggtatgcagccaaagcgatga |