Chlamydia abortus AB7: AB7_1961
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Entry
AB7_1961 CDS
T03773
Name
(GenBank) putative exonuclease
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
cabo
Chlamydia abortus AB7
Pathway
cabo03410
Base excision repair
cabo03430
Mismatch repair
cabo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cabo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AB7_1961
03430 Mismatch repair
AB7_1961
03440 Homologous recombination
AB7_1961
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cabo03400
]
AB7_1961
DNA repair and recombination proteins [BR:
cabo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
AB7_1961
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
AB7_1961
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
AB7_1961
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
PhoU
MitMem_reg
Motif
Other DBs
NCBI-ProteinID:
CED80239
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All DBs
Position
1:191648..193420
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AA seq
590 aa
AA seq
DB search
MASKDNSSVSSPIWIYPKHDPALLSFIIKEFHLHPVAAQTFISRGFQTIDEVRDFLYVHL
SNLHDPELLLDMSKAVQRLLLAKERREHVMVYGDSDVDGITGVALLVEFLRSIEIKVSYC
FLGAFLKHYGELSLLIAKMKEEGVTLLITVDCGITAGKEVSDINKQGIDVIVTDHHMPTG
KIPHCVATLNPKLRDHAYPNKDLTGVGVAFKLARGVVDALQKNHPKLKLDIQHLLDLVSL
GTVTDVGTLLGENRTMVRHGIKEIAKGSRLGLHKLCIFSGVNPSEVTSTDIVLKISPKLN
SLGRLADASKGVELLLTKDPEVADDIIQYLDKINRERQKIEADVFHDVQKILKNQPDIVK
QAAIVLSSQDWHSRVIPIISARLAKAYNKPVAIISNQGGVGKGSLRTIGSFPLLGILQKC
SPMFISYGGHDFAAGIIINEDRIEAFRKKFIHLVNSSLKKEKAVVTLPLDARADFDEIDH
DLLSSIDLFEPFGKGNPVPIFYTIVHQVRYPKLLPGNHLKLYLNYGERNLEGIAFGLGDR
IGALKASWNQPLELAYTPRLSQSANGGVIHLLVRDFHILPLNYKDTTAKF
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atggcaagtaaagataattcttctgtatctagtcctatttggatatatcctaagcacgat
cctgctctactttctttcattataaaggagttccatcttcatccggtcgctgcacaaacg
tttatttcccgaggattccaaacaatagatgaagtccgtgatttcctttatgtgcatcta
tccaacctgcatgatcccgaactgttactcgatatgtcaaaagctgtacaacgtttgctt
ctcgcaaaagaacgtcgtgagcatgtcatggtctacggcgatagtgatgttgatgggatc
acaggcgtggctcttcttgtagagtttttgagatctatagaaatcaaggtcagctattgt
tttttaggagcgttccttaaacattatggcgaactttctttgttgattgctaagatgaag
gaagaaggtgtgactttgctgattaccgtagattgtggaattaccgcagggaaagaagtc
agcgatatcaataagcaaggcattgatgtcattgttacagatcatcatatgcccacaggt
aaaattcctcattgcgtagccacattaaatccaaagctcagagatcatgcttatccaaat
aaagatctcaccggcgtcggcgtcgcttttaaactcgcccgcggtgttgtggacgcctta
caaaaaaatcatcccaaactcaaattagatattcagcatttattagatttagtctcttta
gggacagtgacggatgtcgggactcttttaggagagaatcgtaccatggtacgccacggt
attaaagaaattgctaaagggtcacggttaggactacataaattatgcattttttcagga
gtaaatccttcagaagttacctctacagatattgttttgaaaatctctccgaaactgaat
agtttaggaagacttgccgacgcttctaaaggcgtggagttgctgcttaccaaagatcca
gaagtcgctgatgacatcattcaatatctcgacaagataaatagagaacgccaaaaaata
gaagcagacgtctttcatgatgtgcaaaaaatcttaaaaaatcagcccgatatcgttaaa
caagcagctatcgtactatcatcacaagattggcattcaagagtcattccaattatttca
gcacgcctagctaaagcgtataataagcccgtagctattatttctaatcagggaggggta
gggaaaggatcgttaagaacaataggatctttcccccttcttggcatattacaaaagtgc
tcccctatgttcatatcttatgggggacacgattttgccgcaggcattatcattaatgaa
gaccgaatagaagcttttaggaaaaagttcattcatcttgtgaattcatcattaaaaaag
gaaaaagccgtagtcacccttcccttagatgcccgagcagattttgatgagatcgatcac
gatttactctcttccatcgatctgttcgaaccttttggtaaaggcaatcccgtacccata
ttttataccatagtacatcaggtgcgttacccaaagttattgccaggtaatcatctgaaa
ctctacctgaattacggagaaagaaacttagaaggcatagcttttggattaggcgataga
atcggcgctctgaaagcaagttggaatcaacctttagaacttgcctatacaccacgttta
tcccaatctgctaacggaggagtcatccatttgttagtgcgtgattttcatattcttcca
ctcaattacaaggacacaacagcaaagttttaa
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