Caldithrix abyssi: Cabys_1192
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Entry
Cabys_1192 CDS
T04549
Symbol
kdsB
Name
(GenBank) kdsB 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase)
KO
K00979
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:
2.7.7.38
]
Organism
caby
Caldithrix abyssi
Pathway
caby00541
Biosynthesis of various nucleotide sugars
caby01100
Metabolic pathways
caby01250
Biosynthesis of nucleotide sugars
Module
caby_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
caby00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
Cabys_1192 (kdsB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
caby01005
]
Cabys_1192 (kdsB)
Enzymes [BR:
caby01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.38 3-deoxy-manno-octulosonate cytidylyltransferase
Cabys_1192 (kdsB)
Lipopolysaccharide biosynthesis proteins [BR:
caby01005
]
Lipid A
Cabys_1192 (kdsB)
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Paralog
GFIT
Motif
Pfam:
CTP_transf_3
NTP_transf_3
CwfJ_C_2
Glyco_tranf_2_3
DUF7473
Motif
Other DBs
NCBI-ProteinID:
APF17941
UniProt:
H1XY69
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Position
1410869..1411624
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AA seq
251 aa
AA seq
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MKAVCVIPARFGSSRFPGKPLAKILDKPMIQWVYERASKATLFEKVLVATDDRRIADTVT
RFGGAVCLTPSDVPSGTDRVALAVKDLDVDVVVNLQGDEPLIQPELLDELVSVFRTHPQV
QMATPIKRITDYEDLINPNLVRVVKDKDHFAIYFSRSVIPYLRDVPAQKEWHKNFDYYKH
VGIYAYRKEFLLKLTALPPGHLEQAEKLEQLRVLENGFKIYTIETDYNSVSVDTPEELNQ
LNERLLTQTKG
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atgaaggccgtttgtgtaatacccgcaagattcggttccagccgttttccgggaaagccg
ctggctaaaatattggacaaacccatgatccagtgggtttacgaaagagcgtctaaagcc
acattgtttgaaaaggtgctggtggccaccgatgatcggcgcattgccgacacggttact
cgttttggaggagcggtgtgtttaacgccatccgacgtgccttctggaacggaccgcgtg
gctctggccgtaaaagacctggatgtcgatgtggtggttaatctgcagggggacgaacct
ttgatccagcccgagctgctggacgagctggttagcgttttccggactcatccgcaggta
caaatggccacgcccatcaaacgaattaccgattatgaagatttgataaatcctaacctg
gtgcgcgtggtaaaagataaagatcattttgccatttatttttcgcgcagcgttatcccc
tatttaagggatgtaccggctcaaaaggagtggcataaaaatttcgattactacaaacat
gttggcatttacgcctaccgcaaggagtttttgttaaaactgacagcgctgccgcccggc
catctggaacaggccgaaaagctggaacagctgcgcgtactggagaacggttttaagatt
tacaccattgaaaccgattacaattcggtgagcgtggatacgcccgaagagttaaatcaa
ttaaatgaacgtttattaacgcagactaaaggataa
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