Caldithrix abyssi: Cabys_1422
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Entry
Cabys_1422 CDS
T04549
Symbol
ruvC
Name
(GenBank) ruvC Holliday junction endonuclease RuvC
KO
K01159
crossover junction endodeoxyribonuclease RuvC [EC:
3.1.21.10
]
Organism
caby
Caldithrix abyssi
Pathway
caby03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
caby00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Cabys_1422 (ruvC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
caby03400
]
Cabys_1422 (ruvC)
Enzymes [BR:
caby01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.10 crossover junction endodeoxyribonuclease
Cabys_1422 (ruvC)
DNA repair and recombination proteins [BR:
caby03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Cabys_1422 (ruvC)
RecFOR pathway proteins
Cabys_1422 (ruvC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvC
Tex_YqgF
Motif
Other DBs
NCBI-ProteinID:
APF18171
UniProt:
H1XP84
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All DBs
Position
1720079..1720558
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AA seq
159 aa
AA seq
DB search
MKILGIDPGLQITGFGIIEIDGKGEPKLFEYGHVRTAASEGLSKRVFKIYARINALINEA
QPQVMAMESVFYATNVKTAITMGHVRGAVMVAAETSGIPVFEYAPREIKMSVVGNGAASK
EQVQFMVQHLLGLKEKIEPIDASDALAAALCYWHRTNLK
NT seq
480 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaatattaggcatcgatccggggttacaaataaccggctttggaatcatcgagatt
gacggaaaaggggagccaaagctctttgaatacggccatgtgcgcaccgcagcgtcggaa
ggtctttctaaaagggtgtttaagatttacgcccgtattaatgcgctgatcaatgaagcg
cagccgcaggtgatggccatggaaagtgttttttacgctacaaacgtcaaaacggccatt
accatggggcatgtcagaggcgcggtgatggtagcggcagaaaccagcggaataccggtt
tttgaatacgccccgcgcgaaattaaaatgtcggtggtgggcaacggcgccgccagtaag
gaacaggttcagtttatggtacaacacttattaggtcttaaagaaaagatcgaacccatt
gatgcgtcggacgccctggcagccgctttatgttactggcacagaacgaatttaaagtaa
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