Caldithrix abyssi: Cabys_1562
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Entry
Cabys_1562 CDS
T04549
Symbol
truA
Name
(GenBank) truA tRNA pseudouridine38-40 synthase
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
caby
Caldithrix abyssi
Brite
KEGG Orthology (KO) [BR:
caby00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
caby03016
]
Cabys_1562 (truA)
Enzymes [BR:
caby01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
Cabys_1562 (truA)
Transfer RNA biogenesis [BR:
caby03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Cabys_1562 (truA)
Prokaryotic type
Cabys_1562 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
EF-hand_1
Motif
Other DBs
NCBI-ProteinID:
APF18311
UniProt:
A0A1J1C6P0
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All DBs
Position
1866789..1867541
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AA seq
250 aa
AA seq
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MQKFNNAGKMVRVKAVIEYDGSDYYGWQLQKGQRTIQGELEQALKVLFKKRIPVTGSGRT
DTGVHARGQVAHFDIPEFDLQKLKRALNGLLKEDIVVKELNVSAPDFHARFDATQRWYRY
YISPEPTALNRRYAWTILTPLNLTLMQVGAEMIKPVKDFRSFCKVKSEVKHHRCKILESR
WLRWGDLLVYEIAADRFLHGMVRAIVGSLAAIGSGKITLKEFKEIIQSGDRRLVPQAAPA
RGLVLERVVY
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
ttgcaaaaattcaataatgcgggaaagatggttagagtaaaagcagttatcgagtacgac
ggttcggactattatggctggcagctgcaaaaagggcagcgaaccattcagggagagctt
gaacaggcgttaaaggttctttttaaaaaaagaattccggttacaggctcggggcgaaca
gacaccggggttcatgcgcgtgggcaggtggcccattttgacataccggaatttgatttg
cagaaattaaaacgcgctttgaacggtttactcaaagaagatattgttgtcaaagagcta
aatgttagtgcgccggattttcatgcgcggtttgacgccacacagcgctggtatcgttat
tacatttcgccggaaccgacggcgctaaaccggcgttacgcctggacgattctaacgcct
ttgaacctgacgctgatgcaggtcggcgcagagatgattaagccggttaaggatttccgc
tcgttttgtaaagttaagagcgaagtgaaacaccatcggtgtaagattctggaaagccgc
tggttgcgttggggcgatttgctggtatacgaaattgccgccgatcgctttttacacggt
atggtcagggctattgtcggctcgctggcggctattggcagcggaaaaatcacgctcaaa
gaatttaaagagatcattcagtcgggcgatcgtcggcttgtgccgcaggcggcgccggcc
agaggcctggtgctggaaagagtcgtctattaa
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integrated database retrieval system
