Caldithrix abyssi: Cabys_1606
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Entry
Cabys_1606 CDS
T04549
Symbol
araC-type
Name
(GenBank) AraC-type DNA-binding protein
KO
K18954
AraC family transcriptional regulator, transcriptional activator of pobA
Organism
caby
Caldithrix abyssi
Brite
KEGG Orthology (KO) [BR:
caby00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
caby03000
]
Cabys_1606 (araC-type)
Transcription factors [BR:
caby03000
]
Prokaryotic type
Helix-turn-helix
AraC family
Cabys_1606 (araC-type)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
FAM216B
Motif
Other DBs
NCBI-ProteinID:
APF18355
UniProt:
A0A1J1C6N5
LinkDB
All DBs
Position
1908954..1909685
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AA seq
243 aa
AA seq
DB search
MCWIQNGIDQIEINKTKYKNVSNSVFFFTPDVNWKIYKNAMSPLSGYLLYIPKYILDYPV
FKNLHITQVRFFKSIDEIPKINLSPGIEIRVQSILEMLDELNSTNLANKEEAILSLLNTL
FVYCDGKCNIKSFISDNNQKTALVYKFKKKIEKLFSEYHKVTAYAQLLNVSDKYLNECVK
EILGTNAKSLIDEKLLMTARYELKFTDKPIKEIAFDLGFSSPDYFSYFMKKHTGVSPSQT
RKS
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
ttgtgctggattcaaaacggcattgaccagatcgaaataaacaaaacgaagtacaaaaac
gtgtcgaattcggttttcttctttacgcctgatgttaattggaagatttacaaaaacgca
atgagcccattgtcaggttacttgctatatattcccaaatatatcttagattatcctgtt
ttcaaaaacctccacattacccaggtacgcttttttaagtctattgatgaaataccgaaa
ataaacctttcccctggtattgaaatacgggtgcagtccatactcgaaatgctcgatgaa
cttaacagcactaatctggccaataaagaagaagccattttatcgcttttgaacacactt
tttgtttattgcgatggaaaatgcaatattaaatcgtttatttccgacaataatcaaaaa
accgccctggtctataaattcaaaaaaaagattgaaaaactattttcggaatatcataaa
gttactgcctatgcacaattattaaacgtttcggataaatacctcaacgaatgcgtgaaa
gaaattttaggcaccaacgccaaaagcctcattgatgaaaaactattaatgactgcccga
tacgaactaaaatttacagacaaacccatcaaagaaattgcttttgaccttggattttca
tcaccggattattttagttattttatgaaaaaacacactggtgtttccccttctcagaca
agaaaaagctaa
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