Caldithrix abyssi: Cabys_1853
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Entry
Cabys_1853 CDS
T04549
Symbol
clpB
Name
(GenBank) clpB ATP-dependent Clp protease ATP-binding subunit ClpB
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
caby
Caldithrix abyssi
Brite
KEGG Orthology (KO) [BR:
caby00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
caby03110
]
Cabys_1853 (clpB)
Chaperones and folding catalysts [BR:
caby03110
]
Heat shock proteins
HSP100
Cabys_1853 (clpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
Clp_N
ClpB_D2-small
AAA
AAA_5
AAA_16
AAA_22
Sigma54_activat
nSTAND3
TniB
ATPase_2
Mg_chelatase
NBD_SMAX1
AAA_7
AAA_14
IstB_IS21
MAD
DNA_pol3_delta2
NACHT
Zeta_toxin
bpMoxR
AAA_3
Atg11_middle
AAA_19
AAA_23
DUF7509
AAA_13
Motif
Other DBs
NCBI-ProteinID:
APF18602
UniProt:
H1XSP2
LinkDB
All DBs
Position
complement(2206008..2208626)
Genome browser
AA seq
872 aa
AA seq
DB search
MNLEKFTIKAQEALAEAQRLVTEYGQQQIEPEHILKALLSDSEGVAQAIVKKYGVPLPQL
DQKLEQAIDKFPRVSGGGQVYLSRRANEILNNAFNEARALKDEFVSTEHLLLAISEEKDG
EAGRILASFGLTREMILRALMEIRGNQRVTDQNPEAKYQALERYARDLTELARKGKLDPV
IGRDEEIRRVLQVLSRRTKNNPVLIGDPGVGKTAIVEGIAHRIVNGDVPENLKDKRLVAL
DIGSLIAGAKFRGEFEERLKAVIKEITEAEGKIILFIDELHTIVGAGAAEGAVDASNMIK
PALARGELHTIGATTLDEYRKYIEKDAALERRFQPVLIDEPSVEDTISILRGLKEKYEVH
HGVRIKDSALVAAAVLSKRYINDRFLPDKAIDLIDEAASKLRIEIDSMPEELDDVERRLK
QLEIEMMALKKENDEASKKRLELIKEEKANLEEKAKQLRAQWKAEKETIQQIRELKSKIE
EYKTQMEIAEREGQLDRVAEIRYSLIPQAEKEIEQLNAKLAEIQKERPMLKEEVEEEDIA
EIVSRWTGIPVQRMLESEKEKLLKMEDRLRKRVVGQEEAIRAVADAVRRSRAGLADQNRP
IGSFIFLGSTGVGKTELAKALAEFLFDDENAMIRIDMSEYMERHSVSRLIGSPPGYVGYE
EGGQLTEQVRRKPYSVVLLDEIEKAHPEVFNILLQVLEDGRLTDNKGRTVDFKNTIIIMT
SNLGAGYIREKSENITQEKLEETYEEIRKNVIEFLKQSLRPEFLNRIDDIIVFRPLNKED
MKQIVRLQFERIKKMLEQQDLSAELDESAVEYLVNKGYDPAFGARPLKRLMQKELVNELA
KEVIAGNLAPGDTVVISANEHGLQFSKKRVAA
NT seq
2619 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttgaaaaatttaccataaaagctcaggaggctctggctgaggcccaacgtctg
gttacagaatacgggcaacaacagatcgaacccgagcacatcttaaaagctttgctttct
gatagcgaaggagtggcccaggccattgtgaaaaaatatggcgttcccctgcctcaactg
gatcaaaagctggaacaggccatcgataaatttccgcgcgtttcgggcggcgggcaggtt
tatctgagccgccgggcaaacgaaattttaaacaacgcctttaacgaagcccgagcgctt
aaagacgaatttgtgagcaccgaacatctgctattagccatcagcgaagaaaaagacggc
gaggccggacggattttagcttcgttcggtttaacgcgcgagatgattttacgggcgttg
atggaaattcgcggcaaccagcgcgtaaccgatcagaatcccgaagccaaataccaggcg
ctggaacgatacgcgcgcgacttaaccgagctggcgcgtaaaggcaagctcgatccggta
atcggtcgcgacgaagaaattcgccgtgttctgcaggtgctttcgcgccgcaccaaaaac
aacccggtccttattggcgatccgggcgttggaaaaacggccatcgtcgaaggtattgca
caccgcattgtaaatggagacgttcccgaaaacctgaaagacaaacgtctggtcgcctta
gatattgggtcgttgattgcaggcgccaaatttcgcggcgaatttgaagagcgtttaaaa
gcggtcattaaagaaatcaccgaggcagaaggtaagatcattctgttcatcgacgagtta
cacaccattgtgggcgcaggagcagccgaaggcgctgttgacgcctcgaacatgatcaaa
ccggcactggcgcgcggcgaattacacaccattggcgctacaacgctggacgaatatcgc
aaatacattgaaaaagacgcggccctggaacgtcgttttcagcccgtgctgattgacgag
ccatcggtggaagacaccatttctattttacgcggcctaaaagaaaaatacgaagtgcac
catggcgtaaggattaaggattccgccctggtggccgcagccgtgctttccaagcgctac
atcaacgatcgctttttaccggacaaagccatcgacctgatcgatgaggcggcttccaag
ttgcgcatcgaaatcgattccatgccggaagaactggatgacgtggaacgtcgcttaaaa
caattagaaatcgagatgatggctttgaaaaaagaaaacgatgaggcgtctaaaaaacgt
ctggaattgatcaaggaagaaaaagccaatctggaagaaaaagccaaacaactgcgggcg
cagtggaaggcagaaaaagagaccattcaacaaatccgcgaactaaaatccaaaattgaa
gagtacaaaactcaaatggaaattgccgaacgcgagggccaattagatcgcgtggcagaa
attcgctacagcctgattccacaggccgaaaaagagatcgaacaactcaacgccaaactg
gccgaaatacagaaagaacggccaatgctgaaagaggaagtggaagaagaagacatcgcc
gaaatcgtttcgcgctggacgggcattccggtacaacgcatgctggaaagcgaaaaagag
aaattgctaaaaatggaagatcggctgcgtaaacgagtggttggtcaggaagaagccatt
cgcgctgttgcagacgctgttcgccggtctcgcgccggactggccgatcagaacaggccg
attggttcgttcatctttctcggctcgaccggcgtgggtaaaaccgagctggccaaagcc
ctggccgagtttctgttcgacgacgaaaatgccatgattcgcatcgacatgtcggagtac
atggaacgccattcggtttcgcgcctgatcggttcgcctccgggctacgtgggctacgaa
gaaggcggacagctaaccgaacaggtacgccgcaaaccgtattccgtggtgctgcttgat
gaaatcgaaaaggcgcatccggaagtctttaacatcctgttgcaggtgctggaagatggt
cgactgacggacaacaagggacgcacggtagatttcaaaaatacgatcatcatcatgact
tctaacctgggcgccggatacatccgtgaaaaatcggaaaacatcacccaggaaaagctg
gaagaaacttacgaagagattcgcaagaacgtgattgaatttttgaaacagagtttgcgt
ccggaattcctgaatcgaattgacgacatcatcgtgttcagaccgttgaataaagaggat
atgaagcaaattgtccgtctgcagttcgagcgcattaaaaagatgcttgaacagcaggat
ctgtcggctgagctggacgaatcggccgtcgaatatctggtgaacaaaggctacgatccg
gcctttggcgcacggccgctcaaacgcttaatgcagaaagagctggtcaacgaactggcc
aaagaagtcattgcaggaaacctggcgcccggcgacacggtggtcatttcggccaacgag
cacggtttgcaatttagcaaaaaacgcgtcgctgcctaa
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