Caldithrix abyssi: Cabys_1855
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Entry
Cabys_1855 CDS
T04549
Name
(GenBank) DNA repair protein RadA/Sms
KO
K04485
DNA repair protein RadA/Sms
Organism
caby
Caldithrix abyssi
Brite
KEGG Orthology (KO) [BR:
caby00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
caby03400
]
Cabys_1855
DNA repair and recombination proteins [BR:
caby03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Cabys_1855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
Zn_ribbon_LapB
AAA_25
DnaB_C
ChlI
Lon_C
AAA_22
AAA_24
DUF7129
SLFN-g3_helicase
AAA_16
GvpD_P-loop
ABC_tran
PAXNEB
DUF7125
NTPase_1
Rad51
AAA_14
nSTAND3
AAA_29
Motif
Other DBs
NCBI-ProteinID:
APF18604
UniProt:
A0A1J1C877
LinkDB
All DBs
Position
complement(2209454..2210794)
Genome browser
AA seq
446 aa
AA seq
DB search
MEMARKNKPYYVCSACGYRSEGWLGRCPQCDSWNTMEEFFPAAQNKTRGPAAELLPLMTA
EVAPEHRLSTGISELDHVLGGGNVLGSVTLVGGDPGIGKSTLLLQMLDSYKSQKKKLFIS
GEESLHQIQNRAQRLKISGQNVYYSNVTNLEQIEQALRHELPGVAVIDSIQTILSEKIDG
LPGNISQLRYTTAHLVRLAKELNISLFIIGHVTKEGSLAGPKVLEHLVDTVLYFEGDNKA
DFRILRSVKNRYGPVNEIALFRMESYGLMAVDNPSELFLNLDVEDRMGTAVVAIMEGNRP
VLIEVQALVSKTQFGVPQRTAMGIDHRRMNLLLAVLEKKCGKPFSFYDVFIKTAGGIRVT
DPAADLGICMALVSSMDENPLPREAVYIGEVGLNAELRPVNQIVERIREADKLGFRRVVA
PDSKQKIHLNVQCKVERRRKLQDLIE
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggagatggccagaaaaaacaagccctattatgtatgcagcgcctgcggttaccgctcg
gaaggatggctggggcgctgtccgcaatgcgatagctggaacaccatggaagaatttttt
ccggccgcgcaaaacaagacacgcggcccggcggctgaacttttacccttgatgaccgcc
gaggtggcccccgaacatcgcctttccacgggcatcagcgaacttgaccatgtgctgggc
ggaggaaatgttttaggatcggtaacgctggtcgggggcgatccgggcattggaaaatcg
accttgttgctgcaaatgttggattcttacaaaagccagaagaagaaattattcatctcc
ggcgaagaatcactccaccagattcaaaatcgcgcgcaacgtttgaaaattagcggacaa
aatgtgtactactctaatgtcaccaacctggagcaaatagaacaggccttacgtcatgaa
ttgcctggcgtggcggtcatcgattccattcaaaccattcttagcgaaaagattgacgga
ctgcccggcaacatcagtcagttgcgctacaccacggcccatctggtgcgtctggccaag
gagttgaacatctctttgtttatcatcggtcatgtgaccaaagaaggtagcctggccggg
ccaaaagttcttgagcatttagtggacaccgtgctctactttgaaggcgacaacaaggcc
gattttcgcattttacgcagcgtaaaaaatcgttacggaccggtgaacgagatcgccctg
ttccgtatggaaagctatgggctgatggcggtggataatccttccgaactgtttttgaat
ctggacgttgaagatcgcatgggtacggcggtggtggcgattatggagggcaaccgtccg
gttttgattgaagtgcaggcgctggttagcaaaacgcaatttggcgtgccgcagcgtacg
gccatgggcattgaccacagaaggatgaatttgcttttggccgttctggagaaaaagtgc
ggtaagccgtttagcttttacgatgtgttcatcaaaacagcgggcggcattcgcgtaacc
gatccggcggccgatttaggtatttgcatggcgctggtctcttccatggacgaaaaccct
ctgcctcgcgaagcggtttacattggcgaggtggggctaaacgctgaattgcgcccggtg
aatcaaattgtggaacgcatcagagaagcggacaaactgggtttcagacgcgtggttgcg
cccgattctaaacagaaaattcatttaaatgtgcagtgcaaagttgaaaggcggcggaaa
ctgcaggatttaatagaataa
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