Caldithrix abyssi: Cabys_187
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Entry
Cabys_187 CDS
T04549
Name
(GenBank) DNA polymerase III, delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
caby
Caldithrix abyssi
Pathway
caby03030
DNA replication
caby03430
Mismatch repair
caby03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
caby00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Cabys_187
03430 Mismatch repair
Cabys_187
03440 Homologous recombination
Cabys_187
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
caby03032
]
Cabys_187
03400 DNA repair and recombination proteins [BR:
caby03400
]
Cabys_187
Enzymes [BR:
caby01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Cabys_187
DNA replication proteins [BR:
caby03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Cabys_187
DNA repair and recombination proteins [BR:
caby03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Cabys_187
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
DNA_pol3_delta2
DNA_pol3_gamma3
CLAMP
Motif
Other DBs
NCBI-ProteinID:
APF16938
UniProt:
H1XTI6
LinkDB
All DBs
Position
complement(214984..215979)
Genome browser
AA seq
331 aa
AA seq
DB search
MKTPVQVLKEIDENRIDSVYFLVGGEKFFHDQVINALSRKLFTDRGSRDLNEITLYGTEN
TQSEVLSQFSAYPMLADKKLVIVREFNKMKIEDDATFKKYLTKPPKFSVLVLCASEAPRN
KFFKSLAEAATVVDCKPIRENQLPEWVKQYCHTLGRGIEDQAIHFLVANVGNDILTLKNE
IEKVISFKTDEGPITVDDLHETSGVYREANIFALQKALAQRQLGKSLNITHQLMEAGIDP
TMINAVLFAFFRKSLMAASLRRQGLNIRQVAQKMKMADFQMRDINVVLQKYNFDQIKKAI
KLLNDFDLAQKGIKSSSLQHLELLCYQICRL
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgaagacacccgtacaggtgttaaaagaaattgatgaaaatcgcatcgattccgtttat
tttttagttggcggagaaaagttcttccacgatcaggtgattaatgcgctttcacgcaag
ttatttaccgatcgtggcagtcgcgatctcaatgaaatcacactctacggaacggaaaat
acgcagtcggaagtgctgtcgcagtttagcgcctatcccatgctggcagacaaaaaactg
gtcattgtgcgcgaattcaataaaatgaaaatagaagacgatgcgacgttcaagaaatat
ctgacaaagcctccaaaattttcggttcttgtcttgtgcgccagcgaagcgcctcgaaac
aaattttttaaatctctggcagaagcagccacggtggtggattgcaaacccatccgcgaa
aatcaactgccggaatgggtaaaacaatattgccacacactggggcgggggattgaagac
caggcgattcattttttagtggccaatgtgggcaatgatattttgacgttaaagaacgaa
atcgaaaaagtgatcagctttaagacagacgaagggccgattaccgttgatgatttacac
gagacctccggcgtttaccgtgaggccaatatttttgccctgcaaaaagcgttggcccag
cgccagcttggcaaaagtttgaatattacacatcaattaatggaagccggaatcgatccg
acaatgataaatgcggtcttattcgcctttttcagaaaatcgttaatggctgcatcgttg
aggcgccagggattgaacatccggcaggtcgctcaaaagatgaaaatggcagattttcag
atgcgcgatattaatgttgttttgcaaaaatacaatttcgaccagattaagaaggcgatt
aaattattaaacgattttgatctggcgcagaagggaattaagtcttccagtttacaacat
ttggaacttttgtgttaccagatttgcagattgtaa
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