Caldithrix abyssi: Cabys_2096
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Entry
Cabys_2096 CDS
T04549
Symbol
uvrB
Name
(GenBank) uvrB Excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
caby
Caldithrix abyssi
Pathway
caby03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
caby00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Cabys_2096 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
caby03400
]
Cabys_2096 (uvrB)
DNA repair and recombination proteins [BR:
caby03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cabys_2096 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Cabys_2096 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_22
AAA_30
DUF87
Kinesin
Microtub_bd
LAMB4
FolB
Motif
Other DBs
NCBI-ProteinID:
APF18845
UniProt:
H1XUY5
LinkDB
All DBs
Position
2521656..2523644
Genome browser
AA seq
662 aa
AA seq
DB search
MEKAFKLVSSYKPQGDQPQAIAGLVEGLTRGEKFQTLLGVTGSGKTYTMANVIAQVNKPT
LIISHNKTLAAQLYGEFKGFFPENAVEYFISYYDYYQPEAYIPTTDTYIEKDSSINDEID
RLRLKATSSLLARRDVIVVASVSCIYGIGSPSDYMSMLVMLRVGDHFNRQDLLMRLVDIQ
YTRNDFDFQRGTFRIRGDIVDIFPAYEEFAYRIEFFGSEVDSLKTLDPVSGRTMESVDHA
VIFPAKHFVTPAEKLKTAIENIRLELQERLKELRAQNKLLEAQRLEMRTNFDIEMMQEIG
YCSGIENYSRHLSGREPGQPPYTLIDFFPEDFLMIIDESHQTIPQLRAMYNGDRSRKETL
VEYGFRLPSALDNRPLRFEEFEQRIHQVIFVSATPGDYELEKCKGVVVEQVIRPTGLVDP
EIEIRPVATQIDDLIHEIKERVKRKERTLVTTLTKRMAEDLTDYLQAAGIRVRYLHSEID
ALERVGILRDLRLAEFDVLVGVNLLREGLDLPEVSLVAVLDADKEGFLRSYVSLMQTAGR
AARNVDGRVIFYADRMTESMRKTIDECNRRRKKQIAYNEQMGITPKTIFKTAEEILKTTT
VADVRKQLPKVAEPQVEYGDHLSREELIERLNNEMQIAAANLEFERAAILRDEIKRLKAM
RA
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaagcatttaaattagtttccagttacaagccgcagggagatcagcctcaggcc
attgccggcctggtggaaggcctgacgcggggcgaaaaatttcagactttgttaggcgtt
acgggaagcggcaaaacctacacgatggctaatgtcattgcgcaggtgaacaaacccacg
ctcattatttcgcacaataaaacgttggccgcacaattgtacggcgagtttaagggcttt
ttcccggaaaacgcggtggagtacttcatcagttattacgattactatcagccggaagcc
tacattcccaccacggacacctacatcgaaaaagattccagcatcaatgatgagatagac
cgtctgagactcaaagccaccagctcgttgctggccagaagagatgtgattgtggtggcc
agcgtcagctgcatctatggcatcgggtcgccttcggactacatgagcatgctggtcatg
ttgcgcgtgggcgatcattttaaccgccaggacctgttgatgcgtctggtggacatccag
tacacgcgcaatgactttgattttcagcggggcacctttcgcatccgtggagatattgtg
gatattttcccggcctacgaggagttcgcctatcgaattgaattttttggcagtgaagtc
gattcccttaaaactcttgatcccgtttccggccgcaccatggaaagtgtagatcatgcg
gtgatttttccggccaagcattttgtaacaccggcggagaagttaaagacggccatcgaa
aacattcgcctggagctgcaagagcggctgaaggaactgcgcgcgcagaataaattgctt
gaagctcagcgcttggagatgcgcaccaattttgacattgaaatgatgcaggagatcggt
tactgttcgggaattgaaaactattcgcgccatctttccggcagagagcccgggcagccg
ccttacactttaatcgacttttttcctgaagattttttaatgatcatcgacgaatcgcat
caaaccattccccagctgcgggccatgtataacggcgatcgttcgcgcaaggagacgctg
gtggaatatggttttcgtctgcccagcgcgctggacaaccggccgcttagattcgaagag
tttgaacagcgcatccatcaggtgatctttgtttcggcaacgcccggcgattatgaactg
gaaaaatgcaagggcgtggttgtggagcaggtgattcgtcctaccggtctggtggatccg
gaaatagaaattcggccggtggccacgcagatcgacgatttgattcatgaaataaaagag
cgcgtaaaacgtaaggagcgcacgctggtaaccaccttaaccaagcgcatggcagaggat
ttaaccgattatttgcaggcggcgggcattcgcgtccgctatttacactccgaaatcgac
gcgctggaacgcgtgggtattttgcgcgatttacgtctggctgaattcgatgtgctggtg
ggcgttaacctgctgcgcgaggggctggatctgccggaggtttcactggtcgccgtgctg
gatgccgacaaggagggttttttgcgttcgtatgtttctttgatgcaaacagccggaagg
gcggcccgaaatgtagacggcagggtgatcttttacgccgatcgcatgaccgaatccatg
cgtaaaacgatcgatgagtgcaatcgccgccgcaaaaaacagatagcctataacgagcaa
atgggcataaccccgaaaaccatttttaaaaccgcagaagagattttgaaaaccaccacc
gtggccgacgtgcgcaaacagttgcccaaagtggccgaaccgcaggtggagtatggcgac
catttgagccgggaagagctcatcgagcgcttgaacaacgaaatgcaaattgcggcggcc
aacctggaatttgaacgggcggccattttacgcgacgagatcaagcgtcttaaagccatg
cgtgcctga
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