Caldithrix abyssi: Cabys_2099
Help
Entry
Cabys_2099 CDS
T04549
Name
(GenBank) alpha-amylase
KO
K01176
alpha-amylase [EC:
3.2.1.1
]
Organism
caby
Caldithrix abyssi
Pathway
caby00500
Starch and sucrose metabolism
caby01100
Metabolic pathways
caby01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
caby00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
Cabys_2099
Enzymes [BR:
caby01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.1 alpha-amylase
Cabys_2099
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FlgD_ig
Alpha-amylase
Por_Secre_tail
Alpha-amy_C_pro
CHU_C
Glyco_hydro_70
Motif
Other DBs
NCBI-ProteinID:
APF18848
UniProt:
H1XUY8
LinkDB
All DBs
Position
2526634..2528973
Genome browser
AA seq
779 aa
AA seq
DB search
MRRVLLGLALVLLFSFANLFANPWNGRIVLQGFWWDYWNNNYPNNWATYLADLAPRLSEM
GIDYVWIPPTVKNHSTSSNGYAPFDHYDLGDKYQKGSTSTRFGNKDEFLRAVAVLHANGL
RVIQDVVWNHLANAGSNTGAGGSDPAAWGNTWKNFRYVCYATPVTDESEADYFNRQGRFF
KNWQNFHPNPDHNQNDDDWTGEFWGPDLCYYQGAYGQSSNCTYNPEQSPDYVRNGMRTWN
IWLKKQTGIDGYRIDAAKHFPYWATKDFLWNLQHDAGWASGGDTMFAVGEYVGSKSEMDT
WVDNVNNSDGFSDVVGTMDFSLRQALRDMVYSFGSYDMGTIPSAQQDRRTRTVPFVNSHD
TFRPILDSNGNYSGWDTYNELGGGHIDPYEPRVEVAYAIAFAVDGSPSVFFEDLFDIGAN
GNRWDHHPNDPNELPARDYLVNLIWCHQKLNFKDGEYKVRWQAQDLLIIERSARAIIGAN
DSWDQWQSATITTDFAPGTVLKDYSGANSGTITVDNNQQVTIWVPPCDGSNIRRGYCVYG
PDGISGPVTHQVRTTTQEWEMADDLGDSHEWSLGQGGRLPSYSTALRTIGKIWSEAGEQV
TIEVYPEDAAQSYTLRIYNDQNQQMASFTHTGAGTFYFTPTYQEWLTLKIRNTDSNTPGQ
KVWVKATYLGPQVIDQGASLVGEQGVIYDFRLFNNYPNPFNPSTTLAFEIPKAGQVRLVI
YDLNGRLVKTLFDSRVAQGRHQLQWDGTNFNGDALPSGVYFARLIFDGKTRTQKLVLLK
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atgcgtagagtgttgctgggcctggcgcttgttcttctttttagtttcgccaatctcttt
gccaatccctggaacggcagaattgtcctgcagggattttggtgggactactggaacaac
aactatccaaacaactgggcaacctatctggccgatctggcgccgcgcttgagtgaaatg
ggtatcgattacgtctggattccgccaacggttaaaaaccattcaacctcttccaatggt
tatgcgccgttcgaccattacgatctgggagacaaatatcaaaagggaagtaccagtacg
cgctttggcaacaaagacgaatttttaagagccgtggccgttttgcacgccaatggcctg
cgcgttattcaggatgtggtctggaatcacctggctaacgctggctctaacaccggcgcc
ggcggatcggatcccgccgcctggggaaacacctggaaaaatttcagatacgtttgctac
gccacgccggtaaccgatgaaagcgaagccgactatttcaaccggcagggacgctttttc
aagaactggcaaaactttcatcccaatcccgatcataatcaaaacgacgacgactggacc
ggtgaattctggggacccgatttgtgctactatcagggcgcttacggacagagcagtaat
tgcacctacaatcccgaacaatcgccggattacgtgcgtaacggcatgcgcacctggaat
atctggctaaaaaaacaaaccggcatcgacggctaccgcattgacgcggccaaacacttc
ccgtactgggcgaccaaagattttttgtggaacctacagcacgacgcgggctgggcttcc
ggcggagataccatgtttgccgtgggtgagtatgtgggcagtaaaagcgaaatggatacc
tgggtagacaacgtcaataacagcgacggcttttccgacgtggtgggcaccatggatttc
agcctgcggcaggctctgcgcgacatggtctattcctttggctcttacgacatgggcacc
atcccttcggctcagcaggatcgccggacgcgtaccgtgccctttgtcaacagccacgac
accttccgacccattctggacagcaacggcaactacagcggctgggatacttacaatgaa
ttaggcggcgggcacattgatccctatgaaccgcgcgttgaagtggcctacgccattgcc
tttgccgtggacggttcgccgtctgttttttttgaagatttgtttgacattggcgctaat
ggcaatcgctgggatcaccatcccaacgatcccaatgagctgccagcccgcgattatctg
gtgaatctcatctggtgccatcaaaaattgaattttaaagacggagaatacaaagtgcgc
tggcaggcgcaggatttactgatcatcgagcgcagcgcgcgggccatcatcggcgccaac
gacagctgggatcaatggcagtcggccaccattaccaccgattttgcgcctggaaccgtt
ttgaaagattacagcggcgccaattccggaaccattacggtggacaacaatcagcaggta
accatctgggtgccgccctgcgacggctccaacatccggcgcggttattgtgtgtacggc
ccggacggtatttccggcccggttacccatcaggtgcgaacaaccactcaggaatgggaa
atggccgacgatctgggagacagccatgaatggtcgttagggcagggcgggcgtttgcct
tcgtacagcactgctctgcgaaccatcggcaaaatctggtccgaagccggagagcaagta
accattgaagtctatccggaagacgccgcgcaatcgtacactctgcgcatttacaatgat
caaaatcaacaaatggcctcttttacgcacaccggcgcgggcacgttttatttcacgccc
acctatcaggaatggcttacgcttaaaattcgcaatacggattccaatacgccgggccag
aaggtgtgggtaaaggccacctatcttggtccgcaagtcattgaccagggcgcctcgctg
gtgggagaacagggcgtgatttacgatttcaggttattcaataactatcccaatcctttc
aatccatctaccacgctggcctttgaaatcccgaaagcggggcaggtgcgcctggtaatt
tatgatttgaacggacggctggtaaaaacgctgtttgatagtcgcgtcgcacaggggcgt
caccagctgcagtgggatggcacgaattttaacggagatgccctgccttcgggcgtgtat
tttgcccgtctgatttttgacggaaaaacgcgcacgcaaaaactggtccttttaaaatag
DBGET
integrated database retrieval system
