Caldithrix abyssi: Cabys_2169
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Entry
Cabys_2169 CDS
T04549
Name
(GenBank) CRP/FNR family transcriptional regulator, anaerobic regulatory protein/CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
KO
K10914
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
caby
Caldithrix abyssi
Pathway
caby02020
Two-component system
caby02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
caby00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Cabys_2169
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Cabys_2169
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
caby03000
]
Cabys_2169
Transcription factors [BR:
caby03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
Cabys_2169
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
HTH_Crp_2
Crp
MarR
MarR_2
HTH_36
LacI
HVO_A0261_N
GntR
TrmB
HTH_24
HTH_IclR
HTH_11
HTH_6
TMEM214
HTH_3
Motif
Other DBs
NCBI-ProteinID:
APF18918
UniProt:
H1XV45
LinkDB
All DBs
Position
complement(2604824..2605501)
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AA seq
225 aa
AA seq
DB search
MDIHDLKTIPLFSELDDDALNDIARMMVRQTYKKDNMVLIEEEVGSTMFIILSGRVKISR
ISDEGREVILSILVDGDFFGEMSILDGQTRSANAVTLEDTELLLIHRENFLRILHDYPQV
AINLLKELAHRLRRSDEQIKSLSLQNAMGKVASTLLRIADDSGIIKQGQVEIPQLPPQQD
LANMAGTSRETISRVIKSLGQLGYVKKEGSKLIILDYDKFREDFS
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atggatattcacgatcttaagacgattccattgttttctgaattagacgacgacgctttg
aatgatattgcacgcatgatggttagacaaacctacaaaaaagataatatggtcctgatc
gaagaagaagtcgggtccaccatgttcattatcctcagcggtcgcgttaaaatttcgcgc
attagtgacgaggggcgcgaggtcattctgtcgattctggttgacggtgatttttttgga
gaaatgtccatcctggacgggcaaacgcgcagcgccaatgccgttacgctggaagacaca
gaattactgctcattcatcgggaaaactttttacgcattttacacgattatcctcaggtc
gccataaatcttttaaaagagcttgcgcaccgcctgcgccgcagcgatgagcagattaaa
agtctatctctgcaaaacgccatgggcaaagtggcatccactttgttgcgtatcgccgat
gattccggaattattaaacagggccaggtagaaatacctcaattaccgccgcagcaggac
ctggcaaacatggccggaaccagtcgcgaaaccatttcgcgcgttattaaatcgttggga
cagttaggttatgttaaaaaagaaggcagcaagctgatcattctggattatgacaaattt
cgggaagatttttcttaa
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