Caldithrix abyssi: Cabys_2431
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Entry
Cabys_2431 CDS
T04549
Name
(GenBank) Na+/H+ antiporter NhaC
KO
K18218
tetracycline resistance efflux pump
Organism
caby
Caldithrix abyssi
Brite
KEGG Orthology (KO) [BR:
caby00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
caby02000
]
Cabys_2431
01504 Antimicrobial resistance genes [BR:
caby01504
]
Cabys_2431
Transporters [BR:
caby02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
Cabys_2431
Antimicrobial resistance genes [BR:
caby01504
]
Gene variants
Tetracycline resistance genes
Transporters
Cabys_2431
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Na_H_antiporter
DcuC
TraA
LSM
Motif
Other DBs
NCBI-ProteinID:
APF19180
UniProt:
H1XXH3
LinkDB
All DBs
Position
2889775..2891259
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AA seq
494 aa
AA seq
DB search
MEHFGFWSLLPPLLAIVLAIKTRQVFLSLFFGIWIGWVVLNNGHLFHGTLASIDALVNVF
KEPGNTRTIMFSALVGALITYIQRSGGVDGFIQYVNRFLQKVEKRRKGNSRRTVQLMAWA
TGVVIFVESSINVLTVGSIYRPIFDRLKIPREKLAYIADSISAPTCILIPLNAWGAYIMG
LLLAQGLSNPFKIMLYAYPLNFYPFLAMTAVLVVILTQKDIGPMKKAERRAREEGKVIAD
NAVPMMSNEIVSMAKKEGVVPRARNMLIPIATMVFMMPVGLFYSGWAQLSDPGSMSPGKL
FFEAIGQGSGSKAVLWAVLSALLVAAVMYRTQKIFKLQELIDLLFKGVGGLIPLALLMML
AFAIGKLCRELGTGIYVAEIAQQWLSPHFVPVIIFLVSCFIAFSTGTSWGTFAIMLAIAI
PMAQSMQVHIPLVVGAVLGGGVFGDHCSPISDTTIISSMASASDHIDHVKTQLPYALMAG
TVAALFYLVAGFVY
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atggagcattttggtttctggtctttgcttccgcctttgttggccatcgttttagccatt
aaaaccaggcaggtctttctttcgctttttttcggcatatggatcggttgggtggtactc
aacaatggtcatctttttcacggcacattagccagcatcgatgcgctggtgaatgttttt
aaagaaccgggcaatacacgcaccatcatgttcagcgccctggtcggcgccctgatcacc
tatatccagcgttccggtggcgtggacggttttattcaatatgtcaaccgctttttacaa
aaggtggagaaacgaaggaaaggaaacagccgacgcaccgtgcagttaatggcctgggca
accggcgtggtcatctttgtggaatccagcatcaacgttctgacggtcggttccatctac
cggccgatctttgaccggctaaaaatcccccgcgaaaagctggcctacattgccgattcc
atttcggcgcccacctgcattttaattcccctcaacgcctggggcgcgtacattatgggg
cttttgttagcgcagggattaagcaatccgttcaaaattatgctgtatgcctatcccctt
aacttttacccctttctggctatgactgccgtactggttgtcattttaacgcaaaaggat
attggccccatgaaaaaggccgaacgcagggccagagaagaaggtaaggtcattgccgac
aacgccgtacctatgatgtccaacgagatcgttagcatggccaaaaaagaaggcgttgtt
cccagagcacggaatatgttaatccccatcgccaccatggtttttatgatgcctgtcggt
cttttttactcgggatgggcgcaattgtcagatccgggcagcatgtctcctggaaaactg
ttttttgaagccatcggacagggctccggttcaaaggcggttctctgggcggttttaagc
gccttgctggtcgcggccgtcatgtatcgcactcaaaagatttttaaactgcaggagttg
atagatcttttatttaaaggcgttggcggattaattcccctggctttgttgatgatgctg
gcctttgccatcggtaaactttgccgcgaactgggcaccggcatttacgtggccgaaatt
gcccagcagtggttaagcccccactttgtgccggttattatctttctggtttcctgcttt
atcgctttttccaccggcacgtcctggggaacgtttgccattatgctggccatcgccatt
cccatggcccagagcatgcaggttcacattcctctggtggtcggcgcagtgctgggaggc
ggggtatttggcgatcactgttcgcccatttcagatacgaccatcatttcctccatggct
tcggccagcgaccatattgaccatgttaaaacgcaattgccttacgctttaatggcgggt
acggttgccgcgctcttttatctggtcgcgggatttgtctattaa
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