Caldithrix abyssi: Cabys_2490
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Entry
Cabys_2490 CDS
T04549
Symbol
truB
Name
(GenBank) truB tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
caby
Caldithrix abyssi
Brite
KEGG Orthology (KO) [BR:
caby00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
caby03016
]
Cabys_2490 (truB)
Enzymes [BR:
caby01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Cabys_2490 (truB)
Transfer RNA biogenesis [BR:
caby03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Cabys_2490 (truB)
Prokaryotic type
Cabys_2490 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
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GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
APF19239
UniProt:
H1XXM6
LinkDB
All DBs
Position
complement(2967302..2968036)
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AA seq
244 aa
AA seq
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MQILKKNDPIDASLARQGFIALINKPQDWTSFDVVNKIRHALKIKKVGHAGTLDPFATGL
LIVGAGRGTRALSQFMNLDKTYRAVIRLGVETDTYDVTGKVVKEQDTQMITRQDVEAVIN
EMQGEMLQVPPMYSAKKIKGQPLYKLARKGKEVEREPQKVVIHQAKMLSWQPPLVEVELT
VSKGTYIRTYAHDLGQKLGVGAMLAELARTKIGAFCLEESFELNAFIENWKQTVGQGDED
HKRA
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgcagattctgaagaagaatgatccgattgatgccagtcttgcccggcagggctttatc
gcgctgatcaataaaccgcaagactggacatcctttgatgtggtgaataagatcagacat
gcgcttaaaatcaaaaaagtaggccatgccggaaccctggatccctttgccaccggtctg
ctaattgtgggcgcgggcaggggcaccagagccctgagccaattcatgaatctggataaa
acctatcgggctgtgattcgcctgggcgttgaaacggatacctatgacgtgacggggaag
gtcgtaaaagaacaagatacgcagatgataacaaggcaggacgtggaggcggtaatcaac
gaaatgcagggagaaatgttacaggtgccgcccatgtactcggccaaaaagataaaggga
cagcccctgtacaaactggcccgcaaaggcaaagaagtagagcgtgagccgcaaaaggtg
gtgattcatcaggcaaaaatgctgagctggcagccgccgctggttgaagtggaattaacg
gtttccaaaggaacttacattcgcacctatgcgcacgacctggggcagaagttaggcgtg
ggcgccatgctggccgaactggcgcgcaccaaaatcggcgcgttttgccttgaagagagt
tttgaattgaatgcgttcattgaaaattggaagcaaaccgtcgggcagggcgatgaagat
cataaaagggcttga
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