Caldithrix abyssi: Cabys_2494
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Entry
Cabys_2494 CDS
T04549
Symbol
nusA
Name
(GenBank) nusA NusA antitermination factor
KO
K02600
transcription termination/antitermination protein NusA
Organism
caby
Caldithrix abyssi
Brite
KEGG Orthology (KO) [BR:
caby00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
caby03021
]
Cabys_2494 (nusA)
03009 Ribosome biogenesis [BR:
caby03009
]
Cabys_2494 (nusA)
Transcription machinery [BR:
caby03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
Cabys_2494 (nusA)
Ribosome biogenesis [BR:
caby03009
]
Prokaryotic type
rRNA transcription factors
Cabys_2494 (nusA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
HHH_5
KH_NusA_C
KH_2
S1_2
KH_1
AF1548-like_C
HHH
RNA_pol_A_CTD
HHH_8
Motif
Other DBs
NCBI-ProteinID:
APF19243
UniProt:
H1XXN0
LinkDB
All DBs
Position
complement(2971499..2972788)
Genome browser
AA seq
429 aa
AA seq
DB search
MNVEIMEAITQIAKDKRIDKDHLRDILESIFLGMIEKRFGTTENFDVIVNIDKGDIEIYQ
EKTVVEEVTDPVSEIDLESARKIDPDVEIGEEIVEVIDPQLFGRRLIASAKQNLAQKIRD
FEREHVIEEYKNRIGEIIIGDIHQINSRGIYINQDKTEVFLPRSEKIPSEILRRGQTVRC
LIKEVIEDQKKGRGPEIIVSRADKRFLIRLFELEVPEIYDGIVEIKAVARDPGERAKIAV
ESIDRRIDAVGACVGMKGVRIQAVVRELNGEKIDIINYSSEPEIFISRALTPAKPIKVVV
NEDEKMAVAVIRDDEISLAIGKGGQNLKLASELTGYQIEPLRESEYEKETTVDENVSVED
LHGIPEGIKRKLIDADILYAHEILEQGKENLVKISGIGEKSAEKIIQIAKQYVETTDESS
DVENEEEES
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgaatgttgaaataatggaagccatcacacaaatcgccaaagataagcgaattgacaag
gatcatttgcgagacattctggaatccatttttctgggaatgatagagaagcggtttggc
accacagaaaattttgacgttattgtaaatatcgacaaaggggatattgagatttatcag
gaaaaaaccgttgtcgaagaagttaccgatccggtaagcgagatcgatctggagtcggcg
cgtaagatcgacccggatgttgaaatcggcgaagaaattgtggaggtaattgatccgcag
ttgtttggacggcgcctgatcgcttcggccaagcagaatctggcccagaagattcgcgat
tttgagcgcgaacacgtgatcgaagagtataaaaatcgcattggcgaaatcataatcggc
gatattcatcagattaatagccgcggcatttacatcaatcaggacaaaacagaagtgttc
ctgccgcgcagcgaaaaaatccccagcgaaattctgcgccgcggacagaccgtgcgctgt
ttaatcaaagaggtgattgaagatcagaaaaaaggacgcgggccggaaattattgtcagc
cgggctgataagcgttttttgattcgtctctttgagctggaagtacccgagatttacgat
ggcattgtggaaattaaagccgtggcgcgcgatccgggcgaacgggccaagatcgccgtg
gagtcgatcgatcgcagaattgacgccgtgggcgcctgtgtgggtatgaaaggcgtgcgg
attcaggcggtggtgcgcgaattgaacggtgaaaaaatcgatatcatcaactattccagc
gagccggaaatttttatttcacgcgctctgacgcctgccaaacccataaaagtggtggtg
aatgaagatgaaaaaatggccgtggccgttattcgcgatgacgaaatttcattagccatt
ggtaagggcggacaaaatttgaaactggcctccgaactgaccggttaccagattgagccc
ttgcgtgaatcagaatacgaaaaagagacaaccgtcgatgaaaatgtttcggttgaagac
ctgcacggcattcctgaaggaattaagcgcaagctaatcgacgctgatattttatatgcc
catgaaattttagaacaaggtaaggaaaatctggttaaaatatcgggcatcggtgaaaaa
tcagcagaaaagattattcaaattgcaaagcaatatgttgagactaccgacgaatcttca
gacgttgaaaatgaagaagaggagtcttga
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