KEGG   Caldithrix abyssi: Cabys_2531
Entry
Cabys_2531        CDS       T04549                                 
Name
(GenBank) 23S rRNA pseudouridine 2605 synthase
  KO
K06178  23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
Organism
caby  Caldithrix abyssi
Brite
KEGG Orthology (KO) [BR:caby00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:caby03009]
    Cabys_2531
Enzymes [BR:caby01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.22  23S rRNA pseudouridine2605 synthase
     Cabys_2531
Ribosome biogenesis [BR:caby03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    Cabys_2531
SSDB
Motif
Pfam: PseudoU_synth_2 S4 SYY_C-terminal DUF5990 Ribosomal_S10
Other DBs
NCBI-ProteinID: APF19280
UniProt: H1XYB9
LinkDB
Position
complement(3018583..3019311)
AA seq 242 aa
MMRLNKFLAHAGIASRRKCDDFIKAGFVKVNGKVVDRVGVVIDEKKDTVTFKGKIVKPRK
RFVYIVLNKPKGVVTTASDQFKRKTVLDLIAVPERIYPIGRLDYNTTGVLLLTDDGDLSH
RLLHPNYKVVKVYRVLLNRVIRPIDLHRLRNGIELDGKKTQPCKISELRIVDNGSLLEVE
LTEGRNRQVRRMFETLDYKVRELERISFGGITARGLAPGEWRFLTKKEVSLLKERVGYGS
ER
NT seq 729 nt   +upstreamnt  +downstreamnt
atgatgcgcttgaacaaatttttagcccatgcaggaatcgcttccagaagaaaatgcgat
gattttataaaagccggctttgttaaggtcaacggtaaagtggttgatcgtgttggcgtg
gttattgacgaaaaaaaagataccgttacttttaaaggaaaaatcgtaaagccgcgtaaa
agatttgtttacatcgtattaaacaagcccaaaggcgtggtgaccacggccagcgatcag
tttaagcgtaaaacagtgctggatttaatcgccgttccggaacgtatttaccccatcgga
cggctggactacaacacaacgggcgtacttttgttaaccgacgacggcgacctgtcgcat
cgtctgctgcatcccaattacaaggtcgtcaaagtgtatcgcgttcttttaaacagggtc
attcgtcccatcgatctgcaccgcctgcgaaacggcattgaactggatggcaaaaaaaca
cagccctgcaaaataagcgagttgaggattgtggataacggcagtttgctagaggtagag
ctaaccgaaggtcgcaaccgccaggtgcggcgcatgttcgaaacgttggattataaagtc
cgtgagttagagcgcatctcttttgggggaattacggccaggggcctggctcccggcgag
tggcgctttttaacaaaaaaagaagtaagcctattaaaggagagagtaggttatggaagt
gaaaggtaa

DBGET integrated database retrieval system