KEGG   Caldithrix abyssi: Cabys_255
Entry
Cabys_255         CDS       T04549                                 
Name
(GenBank) topoisomerase-4 subunit B
  KO
K02622  topoisomerase IV subunit B [EC:5.6.2.2]
Organism
caby  Caldithrix abyssi
Brite
KEGG Orthology (KO) [BR:caby00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:caby03032]
    Cabys_255
   03036 Chromosome and associated proteins [BR:caby03036]
    Cabys_255
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:caby02048]
    Cabys_255
Enzymes [BR:caby01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     Cabys_255
DNA replication proteins [BR:caby03032]
 Prokaryotic type
  DNA Topoisomerases
   Cabys_255
Chromosome and associated proteins [BR:caby03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Other chromosome partitioning proteins
    Cabys_255
Prokaryotic defense system [BR:caby02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   Type II TA system related factors
    Cabys_255
SSDB
Motif
Pfam: DNA_gyraseB Toprim DNA_gyraseB_C HATPase_c HATPase_c_3 TOPRIM_C
Other DBs
NCBI-ProteinID: APF17006
UniProt: H1XQL5
LinkDB
Position
complement(270055..271923)
AA seq 622 aa
MATSQTAARYTEASIKSLDWREHIRLRPGMYIGKLGDGSSADDGIYVLLKETIDNSIDEF
MMGYGRVIEVKVTKHSAQVRDYGRGIPLGKVYDCVARINTGGKYDSEVFQKSIGLNGIGS
KAVNALSRYFKVQAIRDGKTKIQEFEYGILKKDHKITKTSEKNGTLIYFEPDPEIFKNFQ
FRLDFIENQIKNYVYLNAGLTIVLNGQRFQSKHGLLDLLTDKLEEGAARYPIIHLKGKDI
EIALTHTNQYGEDYYSFVNGQFTPQGGTHQAAFREGVIKTIREFYKKNFEAMDIRASIAG
AIAVRIQEPVFESQTKTKLGSTHMAPDGPTVRNFVVEFIKTELDNYLHKHPETAELLLKK
IQQSEKERKELAGIKKLANERAKKASLHNKKLRDCRIHYNDTKNDRRFETTLFITEGDSA
SGSITKARDVQTQAVFSLRGKPLNCFGLSKKVVYQNEEFNLLQHALNIENGLEGLRYNNV
VIATDADVDGMHIRLLLMTFFLQFFPDLVRQGHVYILETPLFRVRNKQKTIYCYSEEEKQ
KAREQLGKGVEITRFKGLGEISPDEFRRFIREDIRLEPLVLDKKMQIQKLLSYYMGKNTQ
DRQEFIIDNLRVEKDLVMDESA
NT seq 1869 nt   +upstreamnt  +downstreamnt
atggcgacatctcaaacagcggcccggtacaccgaagcttccataaaatcgctggactgg
cgggagcatattcgcttacggccgggcatgtacatcggtaagttaggcgatggttcttct
gcggatgacggcatctatgtattgttgaaggagaccatcgacaattccatcgatgagttt
atgatgggatatggacgcgttatcgaagtaaaagtaaccaagcattcagcacaggtgcgc
gattacggacgcggcattccgctgggcaaggtttatgattgcgtagcgcgcatcaacaca
ggcggaaagtacgacagcgaagtctttcaaaaatcgatcggattgaacggcatcggttcc
aaagctgttaatgctctttcccgctattttaaagtgcaggccatacgtgatgggaaaacc
aaaattcaggaatttgaatacggtattctaaaaaaagaccataaaatcaccaaaacgtct
gaaaaaaatggaacgttaatttattttgaacccgatcccgaaattttcaaaaattttcaa
ttcaggctggattttattgaaaaccagattaaaaattacgtgtatctgaatgccggtctt
accattgtgttgaacgggcagcgatttcagtctaagcatggcttgttggatctgctaacc
gataaactggaagaaggcgccgcgcgctatccgattatccatctcaaaggcaaggatatt
gaaatcgctttaacgcataccaatcaatacggcgaggattactactcctttgtcaacggt
caatttacgccgcagggcggcacgcaccaggcggcctttagagaaggcgtcattaaaacc
attcgcgagttctacaaaaagaactttgaagccatggacatccgcgcttccattgccggg
gcgatcgccgtacgcattcaggaaccggtgtttgagtcgcaaaccaaaaccaaattgggc
tccacgcacatggcgccagacgggccgaccgttcgtaattttgtggtagaatttattaaa
accgagctggacaactatttacacaagcatcccgaaacggccgagctcttactcaaaaaa
atccagcagtcggaaaaagaacgtaaagagctggcgggcattaaaaagctggctaatgag
cgcgccaaaaaagccagtctgcacaataaaaaactacgcgattgccgaattcattacaac
gataccaaaaacgaccggcgcttcgaaaccacgctgttcattacagaaggcgattcggcc
agcggttccattaccaaggcgcgagacgtacaaacccaggccgtttttagtttgcgcggc
aaaccgctcaattgttttggcctgtctaaaaaagtagtgtaccagaacgaagagttcaac
ctgctgcagcacgctttaaacatcgaaaacggtctggaaggcctgcgctacaataacgtg
gtcattgccaccgatgccgatgtggacggcatgcacattcgtttgcttctcatgaccttt
tttctgcagttttttccggacctggtgcgccagggacatgtttacatcctggaaacaccg
ctgttccgtgtgcgcaacaagcaaaaaaccatttactgttacagcgaagaagaaaaacaa
aaagccagagaacaactgggtaagggcgttgaaatcacgcgctttaaaggactgggagag
atttctccggacgaattcagacgttttatccgtgaagatatcaggcttgaaccgctggtg
ctggataaaaagatgcaaatccaaaaattgctcagttactacatgggtaaaaacacccag
gaccggcaggaattcattattgacaatttacgggttgaaaaagatcttgtaatggacgaa
tcggcttga

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