Caldithrix abyssi: Cabys_2647
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Entry
Cabys_2647 CDS
T04549
Symbol
selD
Name
(GenBank) selD selenophosphate synthase
KO
K01008
selenide, water dikinase [EC:
2.7.9.3
]
Organism
caby
Caldithrix abyssi
Pathway
caby00450
Selenocompound metabolism
caby01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
caby00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
Cabys_2647 (selD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
caby03016
]
Cabys_2647 (selD)
Enzymes [BR:
caby01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.9 Phosphotransferases with paired acceptors
2.7.9.3 selenide, water dikinase
Cabys_2647 (selD)
Transfer RNA biogenesis [BR:
caby03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
Cabys_2647 (selD)
Prokaryotic type
Cabys_2647 (selD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AIRS
AIRS_C
Motif
Other DBs
NCBI-ProteinID:
APF19395
UniProt:
H1XNQ4
LinkDB
All DBs
Position
complement(3157122..3158180)
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AA seq
352 aa
AA seq
DB search
MDDIRLTQLVSCSGUASKVHPEVLDKIIGALKFKSHPALLVGHSSADDASVYRLNADLAI
INTLDFFTPIVDDPYIYGQIAAANALSDVFAMGGEPFVALNILAFHQGKVKPPVVSKILQ
GGIDKAQEVGVVIAGGHSIQDQEIKYGLAVTGKVHPDKIWQNHTVQNGDVLVLTKPIGTG
VVSTAIKQGKLPQHFEDEIVQSMRLINALPVQIARELELDVHACTDVTGFGLAGHLLEMM
GDGIFSAMIRLRSIPKFESFVQYHEDYSLWPGGLHGNRLFVQDQLVARADLGEPSYCVLF
DPQTNGGLLMALPEEDARRLNARALKRGYPFEITVIGKIVDRAEKKIILDES
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
ttggatgatatcagattaacgcaattagtctcttgttccggctgagccagtaaagttcat
ccagaggttctggataagattattggagctttaaagtttaaaagccatcccgctctgttg
gtggggcatagctcggctgacgacgccagcgtgtaccgtttaaacgcggacctggccata
atcaatacgctcgatttttttacgccgattgtggacgatccgtatatttacgggcagatc
gccgcggccaacgctttgagcgatgtgtttgccatgggcggcgaaccgtttgtcgcgctg
aacattctggcctttcatcagggtaaggttaaacctcctgtggtcagtaaaattttgcag
ggcggcatcgataaagcgcaggaagtgggcgtggtcattgccggcggccattccattcag
gatcaggaaatcaagtatggcctggcggtaacagggaaagtgcatcccgataaaatctgg
caaaaccacaccgtgcaaaacggcgatgtgctggtgttgaccaaacccattggcaccggc
gtggtgtccacggccatcaaacagggcaagctgccgcagcattttgaagatgaaattgtg
caaagcatgcggttgattaacgccctgcctgttcagattgcccgcgagctggagctggat
gtccatgcctgtacggacgtgaccggctttgggctggccgggcacctgctggagatgatg
ggagatggtatattttcggccatgatccgtttgcgcagcattccaaaattcgaaagtttt
gtccaatatcatgaagattattcattatggccgggcggcctgcacggcaaccgtcttttt
gttcaggatcagttagtggcgcgcgctgatttaggcgagccgtcgtactgcgttctgttt
gacccgcaaacaaacgggggattgttaatggcgctgccggaagaggatgcgcgccgtttg
aacgccagagctcttaaacgcggatatccctttgaaataaccgtgatcggcaaaattgtg
gacagagcggagaaaaagattattctggatgagtcgtag
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