Caldithrix abyssi: Cabys_2848
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Entry
Cabys_2848 CDS
T04549
Name
(GenBank) PAS domain S-box-containing protein
KO
K07652
two-component system, OmpR family, sensor histidine kinase VicK [EC:
2.7.13.3
]
Organism
caby
Caldithrix abyssi
Pathway
caby02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
caby00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Cabys_2848
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
caby01001
]
Cabys_2848
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
caby02022
]
Cabys_2848
Enzymes [BR:
caby01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
Cabys_2848
Protein kinases [BR:
caby01001
]
Histidine kinases
OmpR family
Cabys_2848
Two-component system [BR:
caby02022
]
OmpR family
VicK-VicR (cell wall metabolism)
Cabys_2848
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c
HisKA
PAS_9
PAS
GAF
GAF_2
PAS_4
PAS_8
HATPase_c_2
GAF_3
Yos1
Motif
Other DBs
NCBI-ProteinID:
APF19596
UniProt:
A0A1J1CB20
LinkDB
All DBs
Position
complement(3397197..3400133)
Genome browser
AA seq
978 aa
AA seq
DB search
MKPDLILWGAALTASAKDIIRKIKSLKEGRLISIIVMIPDVELFERLEIKKLGIDDTIDL
TPNFSELKIKIMIHMELRDKILNYERKMWDLQKIVELQYSILSTNDVYKLGEAINHFIQL
VIDPDYLVHFIYDVKKKDYEFSAVVSRNRLETKIKNELLSIPFWQQYFLTHPNLKAEKLS
DEYVVNFLSTIGIAARTYYQFPWKIGSKVFGLILIGIKNDTELSRDRFNELLFVSNIEKA
RVSEILKGETTVERPDDTTEIRYLFKRMNEDKVARHLNQQLLEHLNGDISIFFNFHEGFR
FLYPQYFFEPNGSAPSIQQEKPPIILLKDYPTIEKFLDSDISSYVVNFDQSGIADVKEML
KNVTGKEFKRGILYNLRIGSEKKGLMIVATAREDHQFAPDQIMESEELIANATAVLEESR
IVKQAQKTLKQLDRIFELGKELTLESDINELLNKIATAIRRTLGWNIVILDQVDPYSGQI
NNVCYYGVTPASYEKIKAANQNGFFTSLINKSFRISNSYFYDHQLSKENITPEDQLQFQL
SLGREWNDDDWLIIPIRSKGRHLGYIAVNDPVDRIRPGEDRVRSLEYFANQAAVVLENAK
LYLDLKNSEEKYRLLAETMTMGLVTCDFKGKIIYINKSLVSILKYKDQTALLDQSFYDLC
SLKKRAEFENQISKLARKNLSARELEKLSRDGIEIELMSNDNEYIPFRIYLTPYYENIKK
AGFIGVLADLRPQRRLEQLKADFNSMIVHDLRSPLNIIQGYIDIVRNQVVGNVTSEQAEL
LSIAKENVDKVLKLIDNFMIASKLEAGRFELNIEINSINALIETVFKHYQMLARKKNIKM
ELDLDENISFLQFDRLRIEQVLNNYLSNAIKFTGPGGKVTVSSRLVKEKNELTDEEIMAV
HVAVKDTGVGIPPEEQDKVFNKYEQTEAGKDASLKGTGLGLAISKEIISLHNGRVWLESE
PGKGSTFYFSLPIIPVKI
NT seq
2937 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccggatctgatattgtggggcgccgctttgaccgcatcggccaaggatattatc
aggaaaatcaaatcattaaaagaagggcgattgatttccattatcgtaatgatcccggat
gtggagcttttcgaacgcctggaaatcaaaaaactgggcattgacgacaccatcgatctt
acgcccaattttagcgaattaaaaatcaagattatgatccacatggaattgcgcgataaa
atcctaaattatgagcgcaaaatgtgggatctgcaaaaaattgtcgaacttcaatattcc
atcctgagtaccaacgacgtttataaattaggtgaagcgattaatcattttattcagttg
gtgatcgatcccgattatctcgttcattttatttacgacgttaagaaaaaggattatgaa
ttcagcgccgtagtatcgcgcaatcgattggaaaccaaaataaaaaatgaactgttgagc
atcccgttctggcagcagtattttttaacccatcccaacttaaaagccgaaaaattatcg
gatgaatatgttgttaattttttgtcaaccataggaattgcggcaagaacctactaccaa
tttccatggaagatcggatcgaaagtgtttggccttattctcataggaattaagaatgat
acggagttgagccgggaccgatttaacgaactgctttttgtttcgaatattgaaaaggca
cgcgtatcggaaatattaaaaggcgagaccactgtcgaacggcctgacgacaccaccgaa
atccgctacctgttcaaacgcatgaacgaggacaaagtagcccgacatttaaaccagcaa
ttacttgagcatttgaatggcgatattagcatcttctttaattttcacgaaggcttcagg
tttttatatccccagtacttctttgaaccgaatggcagcgcgccctccattcaacaggaa
aaaccgcccattattctgttaaaagattacccgaccattgaaaagtttctggattcggat
atttccagctatgtggtcaactttgatcagtcagggattgctgatgtaaaagaaatgtta
aaaaacgttaccggcaaagaatttaaacgcggcattctgtacaacttgagaatcggaagc
gagaaaaagggcctgatgatcgtggctacggccagagaagatcatcaatttgctcccgat
cagatcatggaaagcgaagagttaatagccaatgccaccgccgtgctggaagagagccgc
atcgttaaacaggcgcaaaaaacattaaagcaactggaccgtatttttgaactgggcaaa
gaactgacgctggaaagcgatattaacgagctgttaaataaaattgccactgccatccgc
cgaacgctcggctggaatattgtcattctcgatcaggtcgatccctacagcggtcaaatc
aacaacgtttgctactatggcgttaccccggcctcttatgaaaagataaaggctgctaat
cagaacggattttttacgagtttgatcaataaatcgtttagaatcagcaattcctatttc
tatgatcatcagctgagcaaagaaaacatcactccggaagaccagttgcagtttcagctc
tccttagggcgtgaatggaatgacgatgactggctgatcattcccattcgcagtaaaggc
cggcatctgggctacattgccgttaacgatccggtcgatcgcatccggcccggagaggat
cgcgtacgcagcctggagtactttgccaaccaggcggccgtggtgctggaaaacgccaag
ctttatctcgatctgaaaaattccgaagaaaaataccgcctgttggccgaaaccatgacc
atgggcctggtaacctgcgactttaaaggaaagatcatctatatcaataaaagcctggtt
tccatcttaaaatacaaagatcaaaccgccctgctggaccagagtttttatgatttgtgt
tcgctgaaaaaacgggctgagtttgaaaatcaaatttccaaactggcccgaaagaatctg
tccgccagagagctggaaaagctctcgcgcgacggcatcgaaattgaattgatgagcaat
gacaacgagtacatccccttccgcatttatttaacgccctattacgaaaacattaaaaaa
gccggttttatcggcgtgctggccgacctgaggccgcaacgcaggctggaacagttaaaa
gccgattttaattccatgatcgtgcacgacctgagatcgcctttaaacatcattcagggc
tacatcgatattgtgcgcaatcaggtggtgggcaatgtaacctctgaacaggccgaactt
ttgagcattgccaaagaaaatgtggataaagtgcttaaattgatcgacaacttcatgatc
gcctccaaattggaagccggacgctttgaattgaatattgagatcaattccatcaatgcc
ttaatagaaaccgtgtttaaacactaccagatgctggcccgcaaaaagaatataaaaatg
gaattggatctggacgagaatatctcctttttgcaatttgaccgcctgcgcattgaacag
gtgttaaataattatctgagcaatgccatcaaatttaccgggccaggcggcaaggtaacc
gtttccagccggctggtcaaagagaaaaacgaattaaccgacgaagagattatggccgtt
catgtggcggttaaagacacgggagtgggcattccccccgaagagcaggataaagttttt
aataaatacgaacaaacagaggccggtaaggatgcttcgttaaagggaaccggcctggga
ctggctattagcaaagagattatttctttacataacggtcgcgtctggctggaaagcgaa
ccagggaaggggagtacattttactttagtttacccattattccagttaaaatttaa
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