Caldithrix abyssi: Cabys_3
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Entry
Cabys_3 CDS
T04549
Symbol
recF
Name
(GenBank) recF DNA replication and repair protein RecF
KO
K03629
DNA replication and repair protein RecF
Organism
caby
Caldithrix abyssi
Pathway
caby03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
caby00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Cabys_3 (recF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
caby03400
]
Cabys_3 (recF)
DNA repair and recombination proteins [BR:
caby03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Cabys_3 (recF)
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Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
AAA_21
DUF2813
ATPase_2
AAA_27
ABC_ATPase
AAA_29
Motif
Other DBs
NCBI-ProteinID:
APF16754
UniProt:
H1XV74
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All DBs
Position
2610..3731
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AA seq
373 aa
AA seq
DB search
MKLINLQVKNFRNIKQLTLNITKNINIIYGGNAQGKTSILEAIYLLGITKSFRVNDDRAI
VNSGNEFYEVRGTFRKNLKNTFNIRLFFSINEGKHLFLEQKKVKTFSEMIGKVPVILLSL
EDLELTYGSPSFRRKFIDILISQIDPLYLQALKQLIRILKNRNKLLSMIKEGGQKEEALI
PWNLQLAEHASYVCLKRHEIIEEINPLIYHFYKNVSGRNEKIEIKYKSFFDVAALKEKEV
IKTLYLKKLDEVKERDINYTTTTIGPHRDDLIFFKDDALIKIFGSQGENKTFLISLKFAE
AVLMEKRIDEKPILLLDDIFSELDLTRIQKVVENIQQLQFQTFITTTNAEKFDSGLSDVG
LWHVQNGQVHYEA
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
gtgaagctgattaatctacaggttaaaaattttagaaatattaaacaattaacattaaac
ataacaaaaaatatcaatatcatttacgggggcaacgcacaaggaaaaacgtcaatatta
gaagcaatctatttgctgggaataaccaaaagttttcgcgtaaatgatgatcgggcaatt
gtaaattcagggaatgaattttacgaagtaagaggaactttccggaaaaatttaaaaaat
acctttaatataagattattcttttccataaatgaaggaaaacacctctttttggaacag
aaaaaggtgaaaactttttctgaaatgatcggaaaagttcctgtaatacttttatcttta
gaagatctggaattaacgtatggttcgccgtcttttcgcagaaagtttattgatattttg
atttcgcaaatagatccactctatttgcaggcattaaaacagctgatcagaattttaaaa
aaccgcaataaattattaagcatgatcaaagaaggcgggcaaaaggaagaggcgctaata
ccctggaacttacaattggcggaacatgcttcttatgtgtgtttaaaacgtcatgagatt
attgaggaaataaatccgttaatttaccatttttataaaaacgtctcaggacgcaatgag
aaaattgaaataaaatacaaatccttttttgatgtggcagcgttaaaagaaaaagaggtt
ataaaaacgttgtatttaaaaaaactggatgaagtaaaagaaagagatatcaattacacg
accacaaccattgggccgcatcgagatgacctgatcttttttaaagatgatgcgttaata
aaaatttttggttcgcagggagaaaacaaaacttttttaatcagtttaaaatttgcagag
gcggttttgatggaaaaaagaatcgacgaaaaaccaattctgcttttagacgacatattt
agcgagctggacctaaccagaattcaaaaagtggtggaaaatatccagcagttgcaattt
caaaccttcatcacaacgaccaatgcggaaaaatttgactctgggttgtctgatgttggg
ttgtggcacgtacaaaatggtcaggtgcattatgaagcatga
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