Caldithrix abyssi: Cabys_315
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Entry
Cabys_315 CDS
T04549
Name
(GenBank) Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
caby
Caldithrix abyssi
Pathway
caby00061
Fatty acid biosynthesis
caby00071
Fatty acid degradation
caby01100
Metabolic pathways
caby01212
Fatty acid metabolism
caby02024
Quorum sensing
caby04146
Peroxisome
Module
caby_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
caby00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Cabys_315
00071 Fatty acid degradation
Cabys_315
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Cabys_315
09145 Cellular community - prokaryotes
02024 Quorum sensing
Cabys_315
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
caby01004
]
Cabys_315
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
caby04147
]
Cabys_315
Enzymes [BR:
caby01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Cabys_315
Lipid biosynthesis proteins [BR:
caby01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Cabys_315
Exosome [BR:
caby04147
]
Exosomal proteins
Exosomal proteins of breast milk
Cabys_315
Exosomal proteins of breast cancer cells
Cabys_315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
APF17066
UniProt:
A0A1J1C4Y5
LinkDB
All DBs
Position
complement(358777..360366)
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AA seq
529 aa
AA seq
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MKRKLLKKGQTMAHTKFVHSFLEDSAQRYPDKDAFFVNNRWYTFAYIERHANQLARFLID
LGVRKGDRVAFYIENSVEYVITYYAILKIGAITVALNTEATAMNVDYILQDCDVQNLIVG
QKFYKRLQSLIEKDYLTHFIVWNSGKLKNESSNPKIKSLPEACQSFPSELIHRRIIDLDV
ASIVYTSGSTGQPRGATLTHLNIVTNTRSIVDYLELTADDRIMVVLPFYYIYGKSLLNTH
FFVGGSVVVDNRFMFPNVVLKTMQEQKVTGFSGVPSTFTILLHRSNVRKMQFDSLRYVTQ
AGGAMAPAVQKEVAQVFAPAKLFIMYGATEASARLSYLDPEELPRKWGSIGKGIPNVDLF
IADANGNRLPPETQGEIVARGANIMLGYWNHPEETRKVLKHGLYYTGDLGVMDEEGFIYV
VGRSKDMIKIGGNRASAKEIEDALYEHPQVADAAVIGVADDTLGEAPKAFVVLKDRESSN
MEETLRNFLAKRLASYKIPKYFEFRENLPKNKSGKIQKLKLVEEEKQKQ
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgtaagcttctaaaaaaaggacagaccatggcacatacaaagtttgtacactcg
tttctcgaagacagcgcgcaacgctatccggacaaagacgccttttttgttaacaatcgg
tggtacaccttcgcttacatcgagcgccatgccaatcagctggcccgtttcttaatcgat
cttggcgtacgaaaaggcgatcgtgttgccttttacattgagaattcggtagaatatgtg
attacctattacgccattcttaaaatcggagccattacggtggccttaaataccgaggcc
acggcaatgaatgtcgattatattcttcaggattgcgatgtgcagaatttaattgtggga
caaaaattttataaacgtttgcagtctttaatcgaaaaagattatttaactcattttatt
gtctggaattccggtaaacttaaaaatgagagttctaatcccaaaatcaaatctttaccg
gaagcgtgtcaaagttttccttccgaacttattcaccggcgaatcatcgacctggatgtg
gcctctattgtttatacctcgggcagtacggggcaaccgcgcggcgccaccttaacgcat
ttaaatatagttaccaatacgcgctccattgtcgattatcttgagttgacggcggacgac
cgaattatggtggttttgcctttttattatatttatggtaaatctttacttaacacgcac
ttttttgtaggcggatcggtagtcgttgacaatcgctttatgtttcctaatgtggtttta
aagaccatgcaggaacaaaaggtaaccggattttccggcgtgccctccacgtttaccatt
ttactgcaccgttccaatgtgcgcaaaatgcagtttgattcattgcgctatgttacccag
gccggcggcgccatggccccggcggtgcaaaaagaggtggcgcaggtctttgcgccggct
aaattgtttataatgtatggcgcaaccgaagcgtcggcgcgcctgtcgtatctggaccct
gaagagttaccccgcaaatggggctcgattggcaagggcatccccaatgtggatttgttc
attgccgatgctaatggtaaccgcttgcctcccgaaacccagggcgaaattgtagcccgt
ggcgccaatattatgctcggttactggaatcatccggaagaaacgcgtaaggtgttaaag
cacggattgtattatacgggcgatctgggcgtaatggatgaagaggggtttatttatgtg
gtgggacgcagcaaggatatgattaaaattggcgggaatcgggccagcgccaaagagatt
gaagacgcgctatatgagcaccctcaggttgccgatgcggcggtgatcggcgtggctgat
gacactctgggcgaagcgccgaaggcttttgttgttttaaaagatcgagaatcttccaac
atggaagaaaccttgcgcaattttctggcaaagcgtctggccagttataaaatccccaaa
tattttgaattcagagaaaatttgcccaagaataaatcgggcaaaattcagaagctgaag
ttggtggaagaggaaaagcaaaaacagtag
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