Caldithrix abyssi: Cabys_3343
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Entry
Cabys_3343 CDS
T04549
Name
(GenBank) 23S rRNA (cytosine1962-C5)-methyltransferase
KO
K06969
23S rRNA (cytosine1962-C5)-methyltransferase [EC:
2.1.1.191
]
Organism
caby
Caldithrix abyssi
Brite
KEGG Orthology (KO) [BR:
caby00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
caby03009
]
Cabys_3343
Enzymes [BR:
caby01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.191 23S rRNA (cytosine1962-C5)-methyltransferase
Cabys_3343
Ribosome biogenesis [BR:
caby03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Cabys_3343
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltrans_SAM
PUA_3
Cons_hypoth95
PUA
MTS
DUF6334
Spermine_synth
Motif
Other DBs
NCBI-ProteinID:
APF20091
UniProt:
H1XRK9
LinkDB
All DBs
Position
3974017..3975201
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AA seq
394 aa
AA seq
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MKTVILKKGREKSLLRKHPWIFSGAVKSVEGQPQSGETVAVQDWQGRFLGRGAYSPRSQI
VVRMWSFEQDEAIDNTFFEKRLLQALRLRSTSGIDRESTAMRLIASDADGLPGIIVDRYN
QFLVCQFLSAGAEHWKKTIVHLLQKLLEPQGIYERSDVDVRKKEGLTPTRGLLAGQEPPD
LLEINEQEIRFLVDVKRGHKTGFYLDQRVNRRLVRQWSADRETLNCFAYTGGFGLAALKG
EAKHVTNLEDVAGLLELQEKNFKLNQFKSERYENVKADVFRQLRRYHTEGRRFDLIILDP
PKFVDSQHHLMRASRGYKDINRLAFELLRPEGVLFTFSCSGLMKMDLFQKIVADAALEAN
REAQILQWLSQAPDHPIKLHIPESLYLKGLLCRV
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaccgttattcttaaaaaaggccgtgaaaaatcgcttttgcgcaaacatccctgg
attttttccggagccgttaaaagcgttgagggccaaccgcaaagcggagaaacggtcgcc
gttcaggattggcagggcagatttttaggtcggggagcttactccccccgttcacaaata
gtagtccggatgtggagctttgagcaagacgaagcgattgacaacacctttttcgaaaag
cgtcttttacaggctctgcgtttacgcagcacgtcgggtattgatcgagaaagtacggcc
atgcgtttaatagcttccgatgcggacggcctgccgggaatcattgtggatcgctacaac
caatttctggtttgccagtttttgagcgccggcgccgagcactggaaaaagaccattgtg
catctactgcaaaaactgcttgagccgcaaggcatttacgaacgttcggatgtggatgtg
cgcaaaaaagaaggactgacgccgaccaggggtttgcttgcgggccaggaaccgccagat
ctgctggaaattaacgaacaagaaatacgttttttagtggatgtgaaaaggggccacaaa
acaggcttttatctggatcagcgcgttaatcgccgcctggtgcgtcaatggagcgccgac
cgcgaaacgctcaactgttttgcctacaccggtggttttgggctggccgctttaaagggc
gaggcaaaacatgtaaccaatctggaagatgtggccggtttactggaactgcaggaaaaa
aattttaaactcaaccaatttaaaagcgagcgctacgaaaacgtgaaggcggatgtgttc
cgccagctgcgccgctaccacacggaagggcggcgatttgatttgattattctggatccg
cctaaatttgtcgattcccaacaccatctcatgcgcgccagcagaggttacaaggatatc
aaccgcctggcttttgaactgttgcggccggagggcgtgttgtttaccttttcctgctct
ggtttgatgaaaatggatttgtttcaaaagatcgttgcagacgccgcccttgaggccaac
cgcgaagcgcaaattttgcaatggctgtctcaggcgcccgaccaccccatcaaattacac
attcccgaaagcctttacctgaagggccttttgtgcagagtttag
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