Caldithrix abyssi: Cabys_3352
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Entry
Cabys_3352 CDS
T04549
Name
(GenBank) hypothetical protein
Organism
caby
Caldithrix abyssi
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
He_PIG
Big_9
Cadherin_4
Cadherin_5
PKD_4
PKD
LVIVD
Ig_SIBA-E_2nd
Cadherin
Big_13
InlK_D3
Beta_propel
Filamin
K319L-like_PKD
Motif
Other DBs
NCBI-ProteinID:
APF20100
UniProt:
H1XRL7
LinkDB
All DBs
Position
3986543..3991192
Genome browser
AA seq
1549 aa
AA seq
DB search
MKARNLLKKIIIFVLALNWTHIQAQERVAAEFISKFPPPKAIDGTPYMDGLKQLSIKDHY
LFVVDEYVGVQVLDISDPENLQEVAVIYPENLAPTQNVYLTDSLAFMSCRLDGVWIIDIA
NPAAPQKISRIRPRAESYWVTANLPYVYIAEADSGVMIYDVQQPKSPQLVGRIQTGGFIW
GVGLIQNYLYLIDKRKGLLVYDVTDPTAPLATGGQLEALKYTRSIFFEDNYAYAANGPAG
LTVLDVSQPAKPKHIRTVNLKGYAYSSYKSGSTVFVGNDVLRELQFVDVQNPREPFLIGK
YKSNSHIYYALKKDIYVYTAADSATLVLRYNRPPVLADIQDQVVDEDQTLTFQVKAFDPD
DDAIFYSLSFLPEGAQFDSISGVFSWRPTFEQSGVYGPIVITAHERTQSQLTDSDTIRIT
VNHVNRPPTIAEIPDYEVDENQTLTFTIPEGEDPDKEDAGKLTYAAENLPEGATFDPQTR
VFTWKPTYEQSGEYPIDFTVYDPAGAFAREATVITVHHVDRKPTLAEVPDQTVHEDELLT
FTLHGSDPDKEDQNALSYAAYNLPEGATFDPATATFSWKPTFEQSGVYKDLLFVFTAGAL
SDSITVNITVTHVNRPPVIAAVGDKTVDENQWLQFTVSGEDPDREDFGRLQITAENLPEG
ATFDPDSNLFKWKPTFEQSGVYPDVLFIIHDPSGLTDTAAVTITVNHVNRPPALAEIPAK
VIDENQLLTFELQGSDPDREDQGKLIYTADGLPEGALLEGNQFSWTPTYDQSGVYKITFT
VSDGRLSDSQSTTITVNHVNRPPVMAELAPQTVDENQPLTFTVAGSDPDKEDTGKLTLNA
LNLPEGAVFDPASGKFNWTPTFEQSGVYQVSFTIQDPAGLSDTLTVPITVNHVNRTPVFA
EQPPQVVDENQPLNVQLIPATDPDKEDEGKLKYTALNLPQGASFDPNTLTLSWTPTYEQS
GVYTVTIQVTDGEFTVEQPLQITVNHVNRPPVLQLIADQTIDENQPWQLAVTATDPDKED
EGKLHFSTTNLPQGMTFDSTNAVFSWTPTFEQSGVYSAITVKVTDSGNLSDQKQFSITVN
HVNRAPSLEPIPPIQGVENSPITFQLKGSDPDKEDDGKLVYSCANLPEGAVLDAQSGAFS
WTPNFLQAGAYNLQFKVTDSGGLFAEQSVSMTIDDLNRPPQLQPIEAKKVFENQTLSFKV
TGSDEDTDNTLTYSAEGLPTGAQFDAASQMFTWRPTFEQAGNYQVTFKLTDGKEETSVSV
PIEVVNVNRPPQFTALTDQQVKENERLRFTVTASDPDAGTTLQLQAQNLPEGAQFNADNG
TFEWTPTFEQAGVYAVTFSVSDGDTTVSKEIKITVQNVNRPPVFNEIGAQQVKENEELRF
TISASDPDAGTELKFSAQNLPDGANFDPATQTFVWKPNFDQQGEHQVVFTVSDGESEVKQ
TVVISVQNVNRPPTINGPTSNEAQAGEAIQLRFNGSDPDGDALKFSGDNLPSGAKIDDSG
NFTWTPDDGQVGAHSFVIKVSDGQEEASINVKIDVKPKPQPAPADTTGN
NT seq
4650 nt
NT seq
+upstream
nt +downstream
nt
atgaaagctcgtaatctgcttaaaaaaataattatttttgtattagctttaaattggact
catatccaggcgcaggagagagtagctgccgagtttatcagcaaattcccccctcccaaa
gccatagacggaacgccatacatggacggcttaaaacaattatccataaaagatcattat
ctctttgtggtggatgaatatgttggtgtgcaggtgctggatatctctgatcctgaaaat
ttgcaagaggttgccgtaatttatccggaaaatcttgcgcccacgcaaaatgtgtattta
acggactccctggcttttatgtcctgccgcctggacggcgtgtggattattgacatcgcc
aatcctgcggcgccacaaaagatttcccgcattcgcccacgagccgagtcttactgggtg
acggccaacctgccctatgtttacattgccgaggccgattccggggtgatgatctatgat
gttcagcagcccaaaagtccgcagcttgtcggaaggatccagaccggcggtttcatctgg
ggcgtcggcttaatccagaattatctctacctcattgacaaacgaaaaggattgctggtt
tacgacgttaccgatcccaccgcaccgctggccacaggcggccagcttgaagcgctaaaa
tatacgcgcagcatcttttttgaagataattacgcctatgccgccaacggccccgccggt
ttaaccgtgctggatgtcagccagccagccaaaccaaagcacatccgtacagtaaattta
aaaggttatgcctacagctcctacaaaagcggctcaacggtgtttgtgggcaacgacgtg
cttagagaattgcaatttgtggacgttcaaaatccgcgcgagccttttttgatcggtaag
tacaaatccaattctcatatttactacgctctgaaaaaggacatttatgtttatacagcg
gccgactcggcaacgctggtattgcgctacaatcgcccgccggtgctggccgatatacag
gatcaggtggtggacgaagatcagaccttaacttttcaggtaaaggcatttgatcctgat
gacgacgcaatcttttactcgctctcatttttaccggaaggcgctcagttcgattccatc
agcggtgtgtttagctggcggccgacctttgagcaatccggtgtttacggaccaatcgtt
attacagcccacgagcgcacccaaagccagctgaccgacagcgacaccattcggattaca
gtgaaccatgtaaaccgaccgccaaccatcgccgaaattcctgactacgaagtggatgaa
aatcaaacgcttacttttacgattccggaaggcgaagacccggacaaggaagacgccggt
aaattaacttatgcggcggagaatttgccagaaggagcgaccttcgatccgcagacgcgc
gtctttacctggaaacccacttacgagcagtccggcgagtaccccattgattttacagtg
tacgatcctgcaggcgcttttgccagagaagccactgttattaccgtacatcatgtggat
cgtaagccgaccctggccgaggttccggatcaaacggtccatgaagacgaattgttaacc
tttaccttgcatggttccgatccggataaagaagatcaaaacgctttgagttacgccgct
tataatttaccggaaggcgcaacattcgatccggcaacggctaccttttcgtggaagcca
acctttgagcagtctggcgtttacaaagacttgttatttgttttcacggccggcgccctg
agcgattcgattacggtcaatattaccgttacccatgtcaaccgtccgccggttattgcc
gccgtgggcgacaaaaccgtggatgaaaatcagtggttgcaatttacggtttccggcgaa
gaccctgaccgtgaggatttcggtcgtttacaaattacggccgaaaatctgcctgaaggc
gccacgtttgaccccgattccaatttatttaaatggaaaccaacctttgagcagtccggc
gtttatcccgatgtgctttttatcattcacgatccttcaggcctaaccgatacggcagcg
gtaaccattacggtaaatcatgtcaatcgtccgccggcgctggctgaaattcccgccaaa
gtaatcgatgaaaatcaattgctgacctttgagctgcagggcagcgatccggatcgggag
gaccaggggaaattaatttacaccgccgacggcctgccagaaggcgccctgctggaaggc
aatcagtttagctggacgcctacctacgaccagtccggcgtttacaaaatcacttttacg
gtcagtgacggccggttaagcgacagccaatccacaaccatcaccgtaaaccatgtcaac
cgtccgccggttatggccgaactcgcgccgcagacggtggatgaaaatcaaccgctaaca
tttacggtcgccggttccgatccggataaagaagataccggcaaattaacgttaaatgcc
ctgaatctgcccgaaggcgccgttttcgatccggccagcgggaaattcaactggacgccg
acctttgaacaatcgggcgtgtatcaggtatcgtttaccattcaggatcctgccggttta
agcgatacgctgaccgtgcccattacggtcaatcatgtaaaccggacgccggtttttgcc
gaacagccgccgcaggttgtagatgaaaatcaaccgctgaacgttcagttgattccggca
acggatccggacaaagaagacgaaggaaagttaaaatacacggcgctcaatttgccgcaa
ggcgccagctttgacccaaacaccctgaccctgagctggacgccgacctacgagcagtca
ggcgtttacacagtgaccattcaggttacggacggcgaatttaccgtggagcaacctttg
caaattacggtaaatcacgtcaatcgtccgccggttttacaactcattgcagatcaaacc
atcgacgaaaatcagccctggcaattagccgtaacagccacagacccggacaaagaagat
gaaggtaaattacattttagcacgacgaatctaccccagggcatgacctttgactccacc
aacgctgtcttttcctggacgcccacctttgaacaatcgggcgtttattcggctatcacg
gttaaagtcaccgacagcggcaatttatccgatcaaaagcagttcagcattacagtgaat
catgtgaaccgcgcgccatctctggagccaatccccccgattcagggcgtggaaaattcg
ccgatcacctttcagttaaaaggcagcgatccggataaagaggatgacggcaagctggtt
tacagttgcgccaacctgccggaaggggccgtgctggacgcgcagagcggagcctttagc
tggacgccaaactttttgcaggccggcgcgtacaatttgcagtttaaagtaacggacagc
ggcggcttatttgccgaacagagcgtatcgatgaccatcgatgacttgaatcgcccaccg
caattacagcccattgaagcgaaaaaagtttttgaaaatcaaaccctcagttttaaagta
actggcagcgatgaagacaccgacaacaccctgacttactcggcggaaggtttacccaca
ggcgcgcaatttgatgcggccagtcaaatgtttacctggaggccaacctttgagcaggcc
ggaaactaccaggttacctttaaactgactgacggtaaagaagagaccagcgtttcggtg
cccattgaagtggtgaatgtcaatcgtccgcctcagttcaccgctttgaccgatcagcag
gttaaagaaaatgaacgcctgcgctttacggtaacggccagcgatccggatgcgggaact
acgcttcagctgcaggcgcaaaatctgccggaaggagcgcaatttaacgccgacaatggg
acgttcgagtggacgccaacgtttgaacaggccggtgtttacgctgtaacctttagcgta
agcgacggcgacaccaccgtcagcaaagaaataaaaatcaccgtacaaaacgtcaatcgc
ccgccggtgtttaatgaaatcggcgcgcagcaggttaaagaaaacgaagaactgcgtttt
accatctcagcatcagaccccgatgccggcacggagttaaaatttagcgcgcaaaatctg
ccggacggcgcaaactttgatcccgccacgcaaacctttgtctggaagccgaatttcgat
cagcagggcgaacaccaggtagtctttaccgtcagcgacggcgaaagcgaagtaaaacaa
accgttgtcataagcgtgcaaaatgttaatcgaccgccaacgatcaatggaccgaccagc
aacgaagcgcaggcaggagaagcaattcagctgcggtttaacggaagcgatccggatggc
gacgccttaaagttctctggcgataatctgccctccggcgctaaaatagacgattcaggg
aattttacctggacgccagacgacggccaggtgggcgcgcacagctttgtgataaaagtc
agcgacgggcaggaagaagcctccattaatgtaaagatcgacgtcaaacctaaacctcag
cccgcgccggcagacacaacaggaaattag
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