Caldithrix abyssi: Cabys_34
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Entry
Cabys_34 CDS
T04549
Name
(GenBank) Sugar-specific transcriptional regulator TrmB
KO
K23356
HTH-type transcriptional regulator, sugar sensing transcriptional regulator
Organism
caby
Caldithrix abyssi
Brite
KEGG Orthology (KO) [BR:
caby00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
caby03000
]
Cabys_34
Transcription factors [BR:
caby03000
]
Prokaryotic type
Helix-turn-helix
Other families
Cabys_34
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TrmB
Regulator_TrmB
HTH_11
HTH_24
HTH_5
CENP-B_N
HTH_IclR
CheR_N
Motif
Other DBs
NCBI-ProteinID:
APF16785
UniProt:
H1XUQ0
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All DBs
Position
43773..44606
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AA seq
277 aa
AA seq
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MNETRLMERLRALGFTTYESKAYITLLKNNPSTRYELSKNSGVPRSAIYDVIKKLENMGA
VNALYTSPEKYVPLPPEQLLELLERQFKERIEEARSALKHFDTQIEPGHLWNIVGYRNML
HKAREMISRAEKIIFLSVWDRECKRLKEDLDAARQRGVRIIVFSFTPLNLEGEEIYSYNI
PEKELLNIWERKIILVVDHVQLLMGEADDRYTKKTAWTDNKAIVDIATNHIILDITLYGI
RMKEDVSHSVVAMQQGAFENLDKLIEKYKKRQIEPIF
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgaacgagaccagattaatggagcgcctgcgtgcgctgggttttacgacttacgaatca
aaagcttatattacgcttttgaaaaataatcccagcacaaggtatgaattaagtaaaaat
tccggggtgccgcgctcggcgatttacgatgtgattaaaaaactggagaacatgggagcc
gtaaacgcgctttacaccagcccggaaaaatacgtgcccctgccgccggagcaattgctg
gagcttttggaaaggcaatttaaagaaagaattgaagaagcccgcagcgctcttaaacac
tttgatacgcaaattgaaccggggcacctgtggaacattgtcggctatcgcaacatgctg
cacaaagcgcgcgaaatgatatcccgcgcggaaaaaatcatctttctttccgtatgggat
cgggagtgcaagcgtttgaaagaggacctggacgcagcccggcagcgcggcgtgcgcatc
atcgtcttttcttttaccccgctcaatctggaaggagaggagatctattcctacaacatt
ccggaaaaagagctgttaaacatctgggaacgaaaaatcatcctggtcgttgaccatgta
caattgctcatgggcgaggcggatgaccgctacacaaagaaaacggcctggacagacaac
aaggccattgtggacattgcgaccaatcacatcattctggatatcacgctgtacggaatt
cgcatgaaagaggatgtgagccattcggtggtggccatgcaacagggcgcctttgaaaat
cttgataaattgattgaaaagtacaagaaaagacagattgaaccgatcttttaa
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