Caldithrix abyssi: Cabys_3452
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Entry
Cabys_3452 CDS
T04549
Name
(GenBank) protein involved in polysaccharide export, contains SLBB domain of the beta-grasp fold
KO
K01991
polysaccharide biosynthesis/export protein
Organism
caby
Caldithrix abyssi
Pathway
caby02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
caby00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Cabys_3452
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
caby02000
]
Cabys_3452
Transporters [BR:
caby02000
]
Other transporters
Pores ion channels [TC:
1
]
Cabys_3452
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLBB_2
SLBB
Poly_export
MPI_cupin_dom
Motif
Other DBs
NCBI-ProteinID:
APF20198
UniProt:
H1XS92
LinkDB
All DBs
Position
complement(4097690..4098976)
Genome browser
AA seq
428 aa
AA seq
DB search
MKTVLSIFFIIWILSSGFAQDIPTLQENILLDRENPKYQTSLEKFYKQRSITRTISPQVL
EAEIEDSLYMVGPGDQLGIHVFGEIEIDFLVTVSPEGVVVIPTIGTLNIGKLSLKEAKEK
LKDFINTNYHASTIHIDLISMRKFRVYLVGEVANPGTYFAQATDRVSDIIEVGGGLKDWA
DETNIQIHHRNGRVDTLDILRFYAFGDKDNNPTVDGGDVIYVPAIDLNSPHVIVEWNKEE
INETMNTEQFLFQTKYKRKIYRIINNETLIEFLERIAILDNQVELEHIIVKRAGEEISVD
LFDEYNKEDKFILKKGDALIVPDIVDKVYVQGEVLNPGAYPYQVNLTANDYIGMSGILEK
SKTGSSILVIRAKSGKVLKGGNVIVNKGDIVVVPRKTRESIRDYLSILTPMVSIIISTYS
LYLTISKK
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaaccgttttgagtattttttttattatctggatcctttcatccggttttgctcag
gatattccaacccttcaagaaaacatccttttagatcgcgaaaatcctaaatatcaaaca
tcgctggaaaaattttacaaacagcgttcgataacacgcacgatttctcctcaggtgctg
gaggccgaaatcgaagatagcctgtatatggttggtcctggagatcaactgggcatccat
gtttttggtgaaatcgaaattgattttcttgtaaccgtatcgccggaaggcgtggttgta
attcctaccattggaacgcttaatattggaaaattgtctctaaaagaagcgaaagaaaag
ctaaaagactttattaacacaaattaccacgcttcgaccattcatatcgacttaatatcc
atgcgcaaatttcgtgtttatttagtgggcgaggtcgcaaatcccggaacttattttgcc
caggccacagaccgtgtgagcgatattattgaagtcggcggaggtctgaaagattgggcc
gatgaaaccaatatccagattcatcacaggaatggtagagtagataccctggatattttg
agattttatgcctttggtgataaagataataacccaacggttgacggcggcgatgtgatt
tatgttcctgccattgatttaaacagcccccacgtaattgttgaatggaataaagaagaa
ataaatgaaacaatgaataccgaacagtttctctttcaaacgaagtataaaaggaaaatt
tatcgtatcattaataacgaaaccttaatcgaatttctggaaagaattgccattttagac
aatcaggtagaattagagcacataatcgttaaaagagccggcgaagaaatttctgttgat
ctttttgatgagtacaataaagaagataaatttattttgaaaaagggcgatgcgctcatt
gttccggatatcgttgataaagtgtatgtgcagggcgaagtgctgaatcccggcgcctat
ccataccaggtcaatttaacagctaatgactacatcggcatgtcgggtattttggaaaaa
tccaaaactggcagcagtatccttgtaataagagctaagagcggaaaggtcttaaagggc
ggtaatgttattgtcaataaaggcgacattgtggtcgttccgcgcaagacgcgtgaatcc
atccgtgattatctcagtattcttacgccaatggttagtattattatctctacttatagt
ttatatcttacaatatcaaagaaataa
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