Caldithrix abyssi: Cabys_3667
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Entry
Cabys_3667 CDS
T04549
Name
(GenBank) miniconductance mechanosensitive channel
KO
K16053
miniconductance mechanosensitive channel
Organism
caby
Caldithrix abyssi
Brite
KEGG Orthology (KO) [BR:
caby00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
caby02000
]
Cabys_3667
Transporters [BR:
caby02000
]
Other transporters
Pores ion channels [TC:
1
]
Cabys_3667
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
MS_channel_2nd
MS_channel_3rd
DUF3040
Motif
Other DBs
NCBI-ProteinID:
APF20413
UniProt:
H1XPT4
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All DBs
Position
complement(4350994..4352235)
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AA seq
413 aa
AA seq
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MNTVFFQNIRDFFTDLPLLKEFFILALILLGSFLVYLAAKRMGNKIARKFAARTKTRLDD
IFIEHKVIEVLAFFIPLLIIKNFLFLLPLIGNTVDVIVNLLLTFLSARTVSTLLMAGNSY
YELKPRARRRPIKSYLQIVVIVVYIVAFIIMIGILTRQPPWMLLSGLGAMTAIILLIFRD
TILSFVAGIQINMYDLLHVGDWIEMPQFGADGDVIDIALHTIKVQNWDKSITIVPTHKIL
ENSFRNWRGMEEAGGRRIKRSIYIDQNSIKFCDQEMIDRFLKIQLIHDYVKNKLEELERY
NREHNIDDSVMVNGRRMTNIGTFRAYAAAYIKSHPKINQRLTKMVRQLPPGPQGLPIEIY
AFTNDIRWEVYESIQADIFDHLLAVVPEFELRIFQNPSGKDFAQLTTQIHSRG
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgaacaccgttttttttcaaaacatcagagatttttttaccgacctgccattgcttaaa
gagttttttattctggcgcttattttactgggttcgtttcttgtatatctggctgcaaag
cgcatgggcaataaaatagcccgaaaatttgccgcgcgcaccaaaacgcggctggacgac
atttttattgaacacaaagtcattgaagtactggcgttttttattcccctgctcattatc
aaaaacttcctttttcttttgccgcttattggcaacacggtggatgtcatcgtaaatcta
ttactcacctttttatcggccagaacggtttccaccttattaatggccggcaacagctat
tacgaattaaaaccgcgcgcgcgtagaaggccgattaagagctacctgcagattgtggtg
attgtcgtttacattgtggccttcattattatgattggcattttaacccgccagccgcca
tggatgctgctgagcggtttgggcgctatgacggccattattttgctcatctttcgcgat
accattctttcgtttgtggccggcattcagatcaacatgtacgatctgctgcatgtgggc
gattggattgaaatgccgcaatttggcgcggacggcgacgtaatcgatattgctctgcac
accatcaaggtgcaaaactgggataaatcgattaccattgttcccacgcataaaatttta
gagaactcttttcgaaactggcgcggcatggaagaggccggcggcagacgcattaaacgg
tcgatttacatcgatcaaaattccattaaattttgcgatcaggaaatgatcgatcgtttc
ctgaaaattcagttaattcatgattatgtgaaaaataaacttgaagagctggaacgctac
aatcgcgaacacaatattgatgacagcgtgatggttaatgggcgccgcatgaccaacatt
ggtacttttcgtgcatacgccgcggcctacattaaaagtcatcccaaaattaatcaaaga
ttgaccaaaatggtccgtcagttgccacccggaccgcaggggcttcctatcgagatttac
gcttttaccaacgatatccgctgggaagtttatgagtccatccaggcggatatttttgat
cacctgctggccgtggttccggaatttgaactacgcatcttccagaatccaagcggaaaa
gactttgcgcagttgaccacgcaaattcattcacggggatga
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