Caldithrix abyssi: Cabys_3724
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Entry
Cabys_3724 CDS
T04549
Name
(GenBank) ATP-dependent DNA helicase RecG
KO
K03655
ATP-dependent DNA helicase RecG [EC:
5.6.2.4
]
Organism
caby
Caldithrix abyssi
Pathway
caby03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
caby00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Cabys_3724
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
caby03400
]
Cabys_3724
Enzymes [BR:
caby01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Cabys_3724
DNA repair and recombination proteins [BR:
caby03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Cabys_3724
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
RecG_wedge
Helicase_C
RecG_dom3_C
ResIII
tRNA_anti-codon
Cas3-like_C_2
ERCC3_RAD25_C
DNA_pol_lambd_f
tRNA_anti_2
HHH_5
SLFN-g3_helicase
DUF3638
nSTAND3
SecA_DEAD
AAA_30
Motif
Other DBs
NCBI-ProteinID:
APF20470
UniProt:
H1XP14
LinkDB
All DBs
Position
complement(4411844..4413937)
Genome browser
AA seq
697 aa
AA seq
DB search
MSEEKKTNPLQYLKGIGPKRAAVLQRQGIATLEDLINFFPRKYVDRSHIVDLNLLQPDQE
VTVVGKIEAVGIRHGRRRFLYVVISDGKGILEAVWFNGIEYFKNQFKVGEWVSFSGKVQF
YRGFQMTHPEFDRLGEGELDNMLNTGKILAFYPGTEAFKRVGLNSYTFRKIFYFLFKNMT
VNVQEYLPPKVMGQRQLLPRDRAYYQMHLPEDGKILEKAIYRFKYEEFFNLQLMLALQRA
HLKSKPVGISFPKKSERLEKLYYRLPFKMTEAQKRVVREIRKDMREPTPMNRLLQGDVGA
GKTLVALMAMLIALDNGYQAALMVPTEILAEQHYFNLTRMLEGLDVEINLLTGSTGVKER
RRINETLGSGAPQIIIGTHALIYNEAEMPNLGLIIIDEQHRFGVMQRAKLIEKGRQPDVL
VMTATPIPRTLALTAYGSLDVSIIDELPPNRKPITTIWRFDNTAAKIYRFIREHLEMGEQ
AYIIYPLVEESEKMDLKAATEAYEHLKSTEFKNYRVGLLYGRMRAAEKDEIMKAFVKNEI
QVLVSTTVIEVGIDVPNATIMLIEHAERFGLSQLHQLRGRIGRGKSKSYCILKTPYNIGE
IAQQRMKIMTETQDGFIIAEKDLELRGWGDFFGTRQSGMPDFKIANPITDRPILEEARED
AFKLVKEDPFLRKAEHKRLLEYLRKHLKERMDLINIS
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaagaaaaaaagacaaatcccttacaatatcttaagggaattggcccaaagcgc
gccgcagtgttgcagcgccagggcattgccacgctggaagatctgattaatttctttccg
cgcaaatatgttgaccgcagccatatcgtcgatcttaatctgttgcaaccagatcaggaa
gttaccgtggtgggaaaaattgaagcggtgggcatccgccatggccgccgccgtttttta
tatgtggtgatcagcgacggaaagggcattttagaagccgtctggtttaacggcattgag
tattttaaaaatcaatttaaagtgggcgaatgggtctcgttttccggtaaggtgcaattt
tatcggggatttcaaatgacacatccggaatttgaccggctgggcgaaggtgagctggat
aatatgctcaataccggtaaaatactggccttttacccgggcacagaagcttttaaacgc
gtggggttgaattcctacacctttcgcaagattttttattttctctttaaaaacatgacg
gttaatgtgcaggaatatttgccgccgaaggttatgggccaaaggcaactgttgccgcgc
gaccgagcctattatcagatgcatctgcccgaagacggaaaaattctggaaaaagccatt
tatcgctttaaatatgaagagttttttaatctgcaattgatgcttgccctgcagcgcgcc
cacttaaagagcaaaccggtgggtatttccttccccaaaaaaagcgagcgactggaaaag
ctctactatcgtctgccatttaaaatgactgaagcgcaaaaacgcgtggtgcgcgaaatc
cgcaaagatatgcgagagccaacgcccatgaaccgtctgttgcagggcgatgtgggagcg
ggcaaaaccctggtcgctttaatggccatgctcattgcgctggacaatggctaccaggcg
gcgctgatggtgcccaccgaaatcctggccgaacaacactattttaatcttacacgcatg
ctcgaaggtctggatgtcgaaatcaacctgcttaccggcagcacgggcgtaaaagaacgc
cgcaggattaatgaaacgctgggcagcggcgcgccgcagatcatcattggaacccatgcg
ctaatctacaacgaagccgaaatgcccaacctgggcctgatcattattgacgaacaacac
cgctttggcgtgatgcagcgggcaaaactgatcgaaaaaggtcggcagcccgacgtttta
gtgatgacggccacgcccattccgcgcaccctggccctgaccgcatacggcagtctggac
gtttctattattgacgaactgccgcccaaccgcaaaccgattacaaccatctggcgtttt
gacaataccgccgctaaaatctaccgttttatccgcgaacatctggagatgggcgagcag
gcctacatcatctacccgctggtcgaagagagcgagaaaatggatttgaaagcggccacc
gaggcctatgaacatttaaaaagtacggagttcaaaaattacagggtcggtttgttgtac
gggcgcatgcgggcggccgaaaaagacgaaataatgaaggcgtttgtcaaaaatgaaatt
caggtgctggtttccaccacggtcatcgaggtgggcattgatgtgcccaatgccaccatc
atgttaatcgagcatgcagagcgttttggcctgtcccagttgcatcaattgcggggaaga
atcggacggggcaaaagcaaatcttactgtatcttaaaaacgccgtacaatattggcgaa
attgcccagcaacggatgaaaatcatgaccgaaacacaggacggatttatcatcgccgag
aaagaccttgagttgcgcggctggggcgatttttttggcacgcggcagagcggcatgccc
gattttaaaattgccaatcccattaccgatcggccaattctggaagaggccagagaagac
gcctttaaactggtgaaagaagatccctttttaagaaaagcggaacataaaaggctgctg
gaatatttacggaaacatcttaaagaacgcatggatttaatcaatattagctga
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