Caldithrix abyssi: Cabys_3829
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Entry
Cabys_3829 CDS
T04549
Name
(GenBank) carbamoyl-phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
caby
Caldithrix abyssi
Pathway
caby00220
Arginine biosynthesis
caby00240
Pyrimidine metabolism
caby00250
Alanine, aspartate and glutamate metabolism
caby01100
Metabolic pathways
caby01110
Biosynthesis of secondary metabolites
caby01240
Biosynthesis of cofactors
Module
caby_M00051
De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP
Brite
KEGG Orthology (KO) [BR:
caby00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
Cabys_3829
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
Cabys_3829
00220 Arginine biosynthesis
Cabys_3829
Enzymes [BR:
caby01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
Cabys_3829
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D3
MGS
Dala_Dala_lig_C
ATP-grasp
ATPgrasp_Ter
RimK
ATP-grasp_5
ATP-grasp_3
GARS_A
ATP-grasp_4
HTH_23
Motif
Other DBs
NCBI-ProteinID:
APF20574
UniProt:
H1XYP6
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All DBs
Position
complement(4529285..4532482)
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AA seq
1065 aa
AA seq
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MTKSHYKKVLILGSAALKIGEAGEFDYSGSQAIKALKEEGVYTILVNPNIATIQTSEDLA
DRIYFLPVTPEYVEQVIAKERPEGILLSFGGQTALNTGLTLFRQGVLQKYDVEVLGTRPQ
TIIDTEDRQQFIRRLAEIDVKTARSDVATTVKQAVKVAEKIGYPVMIRVAYALGGLGSGY
CDNEQQLIEKATRALSLAPQILVEEYLHGWKEIEYEVVRDREDNCITVCNMENFDPMGIH
TGESIVVAPSQTLSNDEYHHLREIAIKVIRHLKIVGECNIQYALNPETSDYRVIEVNARL
SRSSALASKATGYPLAFVAAKLALGYTLPELRNAVTKSTSAFFEPALDYVVVKLPRWDLK
KFRLVSRKIGSGMKSVGEIMAIGRHFEEALQKGLRMLEIGALGLTGNENFKFEDVTDELR
APTEERIFAIMQAYDLGFTVDEVHQLSRIDRWFLFKLQKVAQIARELSLFNEHQPPAPLL
RRAKQAGFSDLQIARLCRVSEDDVRNWRMRAGLVPYIRQIDTMAGEYPAQTNYLYLSYNA
MEDDVKGFEDGGQGILILGSGSYRIGSSVEFDWCAVNAGETLKKLGYKTVMLNYNPETVS
TDYDQSDMLIFDEISLETVVEVFRKLKLKGVIISVGGQIPNNLATALEEAGIPILGTKAR
DIDNAENRHKFSALLDRLKIDQPLWKELTSLKEAMAFAQQVGYPVLVRPSYVLSGAAMAV
ASNDDELKAYLQKAVNLSPEHPTVISKFLINAKEIEIDAVARNGEMVAYAISEHVENAGV
HSGDATLVFPPQRLYLETIRKVRQVAAQIAGALNIHGPFNIQFLARDNEVKVIECNLRAS
RSFPFVSKILKYNLIDLATRVMVGAPVEKPDRSLFELNYVGVKAPQFSFTRLEGADPALG
VEMTSTGEVACLGDDFNEAFLKAMQAVGFRLPIKSVLLSTGTITSKAELLEPVRQLSAMG
VKLYATGGTAKFLRENGLKVTRLHWPLEDKKPNAIDYIKDGKIDLVINIPKNFQKEELTN
GYLIRRAAVDFNKMLITNRQIAMRFIESLQNGGMENIQIKSWEEY
NT seq
3198 nt
NT seq
+upstream
nt +downstream
nt
gtgaccaaaagtcattacaaaaaagtgttgattttaggatctgccgctttaaaaatcggc
gaagccggggagttcgattattccggcagtcaggccattaaagccttaaaagaagaaggc
gtttacaccatactggttaatcccaatattgccactattcaaacttcagaagatctggcg
gatcgaatttattttttgcccgtcacgccggaatacgtggagcaggtgattgctaaagag
cgtccggaaggcatattgctgagctttggcggacagacggcgctgaatacggggcttacg
ctctttcggcagggggtattgcagaaatacgatgtggaagttctgggcactcgcccgcaa
acgatcatcgatacggaagaccggcagcaatttatccggcgtctggcagaaatcgatgta
aaaaccgcgcgcagcgatgtggccaccacggtgaagcaggcggttaaagtggccgaaaag
atcggctacccggttatgattcgcgtggcctatgctctgggcggtctgggctccggctat
tgtgacaatgaacaacagttgatagaaaaagccacgcgcgctctgagtctggcgccgcag
attttggttgaagaatatctacacggctggaaagagatcgaatacgaagtggtgcgcgat
cgggaagacaactgcatcaccgtttgtaatatggaaaattttgaccctatgggcatccac
accggcgaaagcattgtggtggcgcccagtcaaactttaagcaacgacgaataccatcac
ctgcgcgaaatcgccattaaggtgattcgtcatctaaagattgtgggcgaatgcaacatt
caatacgctttaaatccggagacatccgattatcgcgttattgaggtcaacgcccggctt
tcacgcagctcggcgctggcctccaaagcgactggctatccgctggcctttgtggcggca
aagctggcgctgggctacaccctgccagaattacgcaatgcggttacaaagagtacgtcg
gccttttttgagccggcgctggactatgtggtggttaaacttccgcgctgggatttaaag
aagtttcgtctggtctcgcgcaaaatcggctcgggcatgaagtctgtgggcgaaatcatg
gccattggccgccattttgaggaagccttgcaaaaaggcttgcgcatgttggagattggc
gcgctgggattgaccggcaatgagaactttaagtttgaagacgtaaccgacgaattgcgg
gcgcccaccgaagaacgtatttttgccatcatgcaggcttatgatctgggctttaccgtc
gatgaggtgcaccagctttcgcgcatcgatcgctggtttttgtttaaactgcaaaaggtg
gcgcaaattgcccgtgaactctccctttttaatgagcatcagccgccggcgccgcttttg
cggcgcgccaagcaagccggcttttcggatttacagattgcgcgcctgtgccgcgtttcg
gaagatgacgtgcgcaactggcggatgcgcgccggactggtgccttacatccggcagatc
gacaccatggccggcgaatatccagcgcagaccaattacctgtacctcagttacaacgcc
atggaagacgatgtgaaaggttttgaagacggtgggcagggcatcctcatcctgggctcc
ggctcttaccgcatcggcagctcggtggagtttgactggtgcgccgttaatgccggggaa
accctcaaaaaactgggctacaaaaccgtgatgctcaactacaatccggaaacggtcagt
acggactatgaccagtcggacatgttgatttttgacgagatttcgctggaaaccgttgtg
gaagttttccgcaagctaaaactcaaaggcgtcattatctccgtgggcggacaaatcccc
aataatctggcaacagcgctggaagaagccggtatcccgatcctgggaacgaaggcgcgg
gatatcgacaacgccgagaatcgccacaaattttcagcccttctggatcgtttaaaaatc
gaccagcccctgtggaaagagttgacttctttaaaagaggccatggcctttgctcagcag
gtgggctacccggtactggtgcgcccttcgtatgttttaagcggcgcggccatggccgtg
gcttctaacgacgacgagttgaaggcctatctgcaaaaagccgtcaacctttcgccggag
catccgacggtgatttcaaaatttttaatcaacgccaaagagattgaaatcgatgcggtg
gcgcgcaacggtgaaatggtggcctatgccatttcggaacacgtggaaaatgccggcgtg
cattccggcgacgccaccctggtgtttccgccgcagcgcctgtatctggaaaccattcgc
aaggttcgacaggtggccgcacaaattgccggcgctttaaacatccacgggccttttaac
attcagtttttagcgcgggacaatgaggttaaggttatcgaatgtaatttgcgggcttcg
cgcagttttccgtttgtctctaaaattttaaaatacaatttaatcgatctggctacgcgt
gtgatggtcggcgcgccggtggaaaagccggatcgctcgttgtttgagctgaattatgtg
ggcgttaaggccccgcagttttcttttacgcgtctcgaaggcgccgaccctgctctgggc
gtagaaatgacttccaccggcgaagtggcctgcctgggcgatgattttaatgaggcgttc
ttaaaagccatgcaggccgtgggctttcggctgcccattaaaagcgttttgctctccacc
ggtaccattacatcaaaggcagaattattggagcctgtgcgtcaactgagcgccatgggc
gttaaactgtacgccaccggcggaacggctaaatttttaagagaaaacggtttaaaagtt
acgcgcctgcactggccgctggaagacaaaaaaccaaatgctattgactacatcaaagat
ggcaaaatcgatctggtcattaatatccctaagaatttccagaaggaagagctgaccaac
ggctatttgattcgccgtgcagcggtggatttcaataaaatgctgattaccaatcgtcaa
attgccatgcggtttatcgaatccctgcaaaacgggggaatggaaaacatccagatcaaa
agctgggaagagtattaa
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