Caldithrix abyssi: Cabys_3985
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Entry
Cabys_3985 CDS
T04549
Symbol
trpR
Name
(GenBank) TrpR family transcriptional regulator, trp operon repressor
KO
K03720
TrpR family transcriptional regulator, trp operon repressor
Organism
caby
Caldithrix abyssi
Brite
KEGG Orthology (KO) [BR:
caby00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
caby03000
]
Cabys_3985 (trpR)
Transcription factors [BR:
caby03000
]
Prokaryotic type
Helix-turn-helix
Other families
Cabys_3985 (trpR)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Trp_repressor
HTH_23
DUF7645
HTH_29
SIX1_SD
HTH_38
HTH_7
HTH_68
DUF7869
SRI
Motif
Other DBs
NCBI-ProteinID:
APF20730
UniProt:
H1XX34
LinkDB
All DBs
Position
4726241..4726519
Genome browser
AA seq
92 aa
AA seq
DB search
MDKHFSEICEFLAKTDDAKTIARFLESLLTPKEVKTLSSRWQIVKLLDQGVPQRKIAKDL
HLSLCKITRGSKELKKRNSILKKAISQYQTDG
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
gtggacaaacatttttctgaaatctgtgaatttttagcaaaaaccgacgatgctaaaacc
attgccagatttttagagagtctgttgacccctaaagaagtaaaaacgctttcgtcgcgc
tggcaaattgttaaactgttagatcaaggcgtgccgcagcgcaaaattgccaaagacctt
catttaagtctgtgcaaaataaccagggggtctaaagagctgaagaagcgcaattccatt
ttaaaaaaagcaatcagtcaatatcaaacggatggttaa
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