Caldithrix abyssi: Cabys_4000
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Entry
Cabys_4000 CDS
T04549
Name
(GenBank) TRAP-type C4-dicarboxylate transport system, substrate-binding protein
KO
K11688
TRAP-type transport system periplasmic protein
Organism
caby
Caldithrix abyssi
Pathway
caby02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
caby00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Cabys_4000
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
caby02000
]
Cabys_4000
Transporters [BR:
caby02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
Cabys_4000
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DctP
Motif
Other DBs
NCBI-ProteinID:
APF20745
UniProt:
H1XWH6
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All DBs
Position
4746315..4747325
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AA seq
336 aa
AA seq
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MSVKISRMVLFILVATGFLFSKPIVIKFATLAPDGSSWMKIMREFAAEIKEKTDGQVIFK
IYPGGIQGDEKDVLRKIRINQLQGAGFTGVGMGEILPEVRVLDTPFFFKNYAELDYVLNK
FDPYFAQRFKKKGFTLIGWAEVGSVYIFTSKKVQTVDDFKKIKMWIWEGDPVAEATFKAF
GLNPIPLSVTDVLTSLQTGLIEGVYTSPLACLVLQWFTKVKYVVDVPLTISNGAVLISNR
AFKKISPEHQQIVRETGYQYFRRLTETSRKDNEKSLLNMQQNGIQLLKLSSPENLKRFDE
IGEQARRSLIGKLYDEELLIKIESTLQEFRTKKNRE
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtaaaaatcagcagaatggttcttttcatattagtggctaccggctttttattc
tccaaaccgatcgtcattaaatttgccacgctggcgcccgatggctcttcctggatgaaa
ataatgcgtgaatttgccgcggaaatcaaggaaaaaaccgacggtcaggtgatctttaaa
atctaccccggcggcattcagggcgatgaaaaagacgttctgcgaaaaattcgcattaat
caactgcagggcgcgggattcacaggcgttggcatgggagaaattttacccgaagtgcgc
gttctggatacgcccttcttttttaaaaattacgccgagctggactacgtgttaaataaa
ttcgatccttattttgcccaacgctttaagaaaaaaggatttactttaatcggctgggca
gaggtcggcagcgtttacatttttacctcaaaaaaagtacaaacggtagatgactttaaa
aagattaaaatgtggatctgggaaggcgatcccgttgccgaggcgacctttaaagccttt
ggactgaaccccatcccactttctgtaacagatgtgctgaccagcttacaaaccggctta
atcgaaggcgtttacacctcgccgctggcctgtctggttctgcaatggttcactaaagtc
aagtacgttgtcgatgttcccctgaccatttccaacggcgcggttttaatctctaaccgg
gcctttaaaaagatctctcccgaacaccaacaaatcgtccgtgaaacaggataccaatac
tttcgccgtttaacggaaaccagccgcaaggataatgaaaaatcactattgaatatgcag
caaaacgggattcaacttttaaagctctcttctccggaaaatttaaaacgatttgatgaa
ataggcgagcaggcgcgtcgttcgttgatcgggaaattgtacgatgaagagctgttaata
aaaattgaatccaccctgcaggaattccgtaccaagaaaaacagggaatag
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