Caldithrix abyssi: Cabys_4026
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Entry
Cabys_4026 CDS
T04549
Name
(GenBank) ATP-binding cassette, subfamily B
KO
K18889
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
caby
Caldithrix abyssi
Pathway
caby02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
caby00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Cabys_4026
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
caby02000
]
Cabys_4026
Transporters [BR:
caby02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
Cabys_4026
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
AAA_23
NB-ARC
AAA_22
AAA_16
AAA
DUF87
RsgA_GTPase
TsaE
AAA_21
nSTAND3
MMR_HSR1
DUF3094
AAA_30
AAA_19
G-alpha
AAA_15
Halogen_Hydrol
Peptidase_M50
Motif
Other DBs
NCBI-ProteinID:
APF20771
UniProt:
H1XWF8
LinkDB
All DBs
Position
4773289..4775043
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AA seq
584 aa
AA seq
DB search
MDVFRLFRQLWPYLMRYRLKLFLGLIFIVISNLIAIVNPQIVRQAIDYLKGDIQTMRLFQ
YAGLIVLITLVQGVFRFLMRRTVIVVSRLVEFDLRNELFARLQSLSQNFFQRTPTGDLIA
RMTSDLNAIRSVMGPGIMYTINTATTMILVFVMMISISRLLTLIALLPIPLLVFLVSYFS
RQINKRYSAVQAQFAEISTRVQENLAGIRIIKSYVKEKSELQDFNRINREYINKSLHYVK
VHAAFRPMMMLLVGLSVVLTLLIGGRLIISGTITLGQFVAFNMYLGMLVWPSIALGWVLG
LFYQGVASMKRLNLIFDARPDIVDAPDVKKVTRLHGAIRFERLNFSYANGSSEVLKDIDF
QVEAGQVVALIGRTGSGKSTIIKLIARIYDAPDDSILIDDIPIKKIPLKTLREHIGYVPQ
ETFLFSDTIRNNIAFARPDASLEEIEWAARMAEVHQSIVEFPDGYDTLLGERGINLSGGQ
KQRLTLARALLKKPSILLLDDALSAVDNLTEERILQHLKQVMKNKTCFWVSHRISAIRHA
DLILVLDQGQIVERGTHESLLALGGLYADIFEKQQLEEFVTQVD
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atggatgtgttccgcttatttcgccagctatggccctatttaatgcgttacagactcaag
ctttttttgggtttaatttttatcgtcatcagtaatttgatcgccatcgtcaatccccag
attgtgcgccaggccatcgattatttaaaaggcgatatccagaccatgcgccttttccaa
tatgcaggattaatcgttttaatcaccctggttcagggcgtttttcgttttttaatgcgc
agaacggttatcgtggtttcgcgtttggtggaatttgatctgcgcaacgagctttttgcc
cgtcttcaaagcctttcgcaaaacttctttcagcgtacgccaaccggcgatctcatcgcc
cggatgaccagcgatttaaacgccattcgctcggtaatgggcccgggcatcatgtacacc
atcaacaccgccaccaccatgattctggtttttgtgatgatgataagtattagcaggctt
ctgacgctcatcgccttactgcccattccattgctggtttttctggtcagctatttcagc
cggcagatcaacaaacgttactcggcggttcaggcgcagtttgccgaaatcagcaccaga
gttcaggaaaatcttgctggcatccgcatcatcaaatcttacgttaaagaaaaaagtgaa
ctgcaggattttaaccgcattaaccgcgaatacatcaacaaaagcctgcactatgtaaag
gtgcatgcggcgttcagaccgatgatgatgctgctggtggggcttagcgtggtgttaacc
ctgttaatcggcgggcggttgattatttccgggacgatcaccctgggtcagtttgtagcc
tttaacatgtacctgggaatgctcgtctggccttcgatcgcgctgggctgggtgcttggc
ctgttttaccagggcgtggcttccatgaaacgcctgaacctgatctttgacgcccggccg
gatatcgtcgacgcccccgacgttaaaaaagtgacgcgactgcatggcgccattcgcttt
gaacgcctcaacttttcatacgccaacggctcttcagaagttttaaaagatatcgatttt
caggttgaagccggacaggtggttgccttaatcggccgaacgggaagcggcaaatctacc
atcatcaagctaattgcgcggatttacgacgcccccgatgattccattttgatcgacgat
attcccatcaaaaaaatccctcttaaaactttacgcgagcacatcggttacgttccgcaa
gaaacctttctcttttccgacaccatccgcaacaacatcgcttttgcccgaccggacgcc
tcacttgaggaaattgaatgggcggccagaatggccgaagtccatcagagtattgtcgaa
tttcccgacggttacgacacattgttaggcgaacggggcatcaatctttccggaggacaa
aaacaacgtttaactctggcccgcgctcttttaaaaaaaccgtccattcttttgttagac
gacgccctgtctgccgtggataacctgacggaagaacgtattctgcagcatctaaaacag
gtcatgaagaacaaaacctgcttctgggtgtcgcaccgcatttcggccattcgacacgcc
gacctaattctcgttcttgaccagggccagatcgtggaacgcggcacgcacgaatctctg
ttggcactgggtggcctttatgccgatatttttgaaaaacagcagctggaagaatttgtt
acgcaggtggattaa
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