Caldithrix abyssi: Cabys_4216
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Entry
Cabys_4216 CDS
T04549
Symbol
mnmE
Name
(GenBank) mnmE tRNA modification GTPase trmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
caby
Caldithrix abyssi
Brite
KEGG Orthology (KO) [BR:
caby00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
caby03016
]
Cabys_4216 (mnmE)
Transfer RNA biogenesis [BR:
caby03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
Cabys_4216 (mnmE)
Prokaryotic type
Methyltransferases
Cabys_4216 (mnmE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
Dynamin_N
Ras
AIG1
Hpr_kinase_C
RsgA_GTPase
AAA_24
GTP_EFTU
Roc
AAA_29
AAA_22
MMR_HSR1_Xtn
nSTAND3
AAA_18
GCV_T
AAA_16
CRS1_YhbY
Phage_int_SAM_5
Motif
Other DBs
NCBI-ProteinID:
APF20961
UniProt:
H1XV81
LinkDB
All DBs
Position
complement(4974367..4975740)
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AA seq
457 aa
AA seq
DB search
MNEDYLSKDTIIAPISGLSGGSVHLIRISGTKAVEITSRFFSNSRFSRAEKNRFFYGQLV
NEQNEPLDDVIVLLYRKPHSYTGEDVVEISCHGNILITEQIIELYLRQGCRLAQPGEFTK
RAFMNGRIDLVQAESIASLISARSEKALKNAIQQLEGKFSLEIKEIKQDLIQSISLLELN
LDFAEEDIEVIEDQQVLKLIDKIMNKIERYLNSYQQGKLLLNGVQVLITGKPNVGKSSLM
NALLEKDRVLVSDIPGTTRDFVHDEIYLENVLVKFIDTAGIRISDDKLEKEGIKRAEKLF
SDVDLILFLFDASQPLDDEDFYLIKKLKDFKEKVIFVGNKIDLNFLEENKQYLGERPLLK
ISAKNRTNIESIKNQIKKIIQKTDTQQVIISNERQYGLLKKAREELKRAKNTLTQKTGHE
FVAMELREVVDLLSEITGEITNEDILNNIFANFCIGK
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaagattatttaagcaaggacactatcatcgctcctatttcaggattgagcggt
ggtagtgttcatttaattcgaataagcggaactaaagccgtcgaaattaccagtcgattc
ttttccaacagccgtttttcgcgggctgaaaagaatcgttttttttatggacagttagtc
aacgaacagaacgaaccacttgacgatgtaattgttttgctttaccggaaaccacactct
tacacgggcgaagatgttgtggaaattagctgtcatggcaacatattgattacggaacag
attatagagctttatctcaggcagggatgccgacttgcacagccaggtgaatttaccaaa
cgcgcttttatgaatggcagaatcgacctggtgcaggccgagtccattgcttccctcatt
tccgcacgctctgaaaaggcattaaaaaatgccattcaacaattggaaggtaaattttcg
ttagaaatcaaagagatcaaacaggatttaatccaatccatttctttattggaacttaat
cttgattttgccgaagaagacatcgaggtgatcgaagatcagcaagtcctaaaactgatt
gataaaataatgaacaaaatcgaaaggtatcttaatagttaccagcagggaaagctgctg
ttaaacggcgtacaggtgttgattaccggcaagcccaatgtgggcaaatcgagcctgatg
aacgctctgttagaaaaagatcgcgttctcgtttccgacatacccggcactacgcgagac
tttgtgcacgacgaaatttatctggaaaatgttctggtaaaattcattgatacggcaggc
atcagaatttccgatgataaactggaaaaagaaggaataaaacgcgctgaaaaattattt
tccgatgtggatttgattttatttttgtttgacgcctcacaaccgctggacgatgaagat
ttttacctgattaaaaaattaaaggattttaaagaaaaagtaatatttgtaggtaataaa
attgatcttaattttttagaagaaaataagcagtatttaggggaacgtccgttgttgaaa
atttctgccaagaatcggaccaatatagaatccataaaaaaccagataaaaaagatcatt
caaaaaacggacacacagcaagtcattatcagcaacgaacgtcaatacggcttgctaaaa
aaggcaagagaagaattgaaaagagctaaaaataccctgacgcaaaaaacaggacatgaa
tttgtggccatggaattaagagaggtggttgatcttctttcagaaattacaggagaaatc
acaaacgaagatattttaaacaacatcttcgccaatttttgcatcggtaaataa
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