Caldithrix abyssi: Cabys_443
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Entry
Cabys_443 CDS
T04549
Name
(GenBank) Phosphotransferase enzyme family protein
KO
K06958
RNase adapter protein RapZ
Organism
caby
Caldithrix abyssi
Brite
KEGG Orthology (KO) [BR:
caby00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
caby03019
]
Cabys_443
Messenger RNA biogenesis [BR:
caby03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
Cabys_443
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PapZ_C
APH
TCAD9
EcKL
Motif
Other DBs
NCBI-ProteinID:
APF17194
UniProt:
H1XSB8
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All DBs
Position
complement(511682..513121)
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AA seq
479 aa
AA seq
DB search
MNQEIKGHLLNLFERWAGEKATSFEPLPAHGSDRKYYRIKGKDKQAIGVFNPDLKENIAF
VTFTKHFRRLKLNVPEIYLQELDKNIYLEEDLGDTTLFSFLTEVRQKEGFSQKIIDVYKK
VAAYLPRFQVEANEGLDYSVCYPRASFDRQSMHWDLNYFKYYFLKLAKIPFDEQSLENDF
QTFMDFLLATDRDYFLYRDFQSRNIMLVNGEPYFIDYQGGRKGALQYDLASLLFDAKADI
PSEVRQQLLEEYLKALENYVPVNREKFLQYYYGYVYIRIMQALGAYGFRGFYERKEHFLK
SVPYAIQNLEWLLHNADLPIDIPQLTAVWEQLVRSSYLRQFGDAHLRLTVRIQSFSYKRG
IPVDEKGHGGGFVFDCRMLPNPGREARYKNLTGLDRPVIEFLQKAPEVKTFLQHVQGLLD
LMVPNYLQRNFTDIMVAFGCTGGQHRSVFCASQLAEYLKKKYDIDVQLRHRELEMWQGE
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
gtgaatcaggaaattaaaggacatttattaaatctattcgaacgctgggccggcgaaaag
gccaccagttttgaaccgttgcccgcgcacggctctgatcgcaaatattaccgcatcaag
ggcaaagacaaacaggccatcggcgtttttaatcccgatttaaaagagaatatcgccttt
gtgacctttaccaaacattttcgccgacttaagttgaacgtgccggagatctatctccag
gagctggacaagaacatttacctggaagaagacctgggcgacaccacgcttttttctttt
ttaacagaggtgcggcaaaaagagggcttttcccaaaagatcatcgacgtttacaaaaaa
gtggcggcttatttgccccgctttcaggtggaagccaatgaaggactggattacagcgtg
tgttatccgcgcgccagtttcgaccgccaatccatgcactgggatctgaattatttcaaa
tattatttcttaaaactggctaaaattccgtttgacgaacaaagtctggaaaacgacttc
cagacctttatggattttctgctggccaccgatcgggattattttctgtaccgtgatttt
cagtcgcgcaatattatgctggtcaacggcgagccttactttatcgactaccagggcggg
cgtaagggcgccctgcagtacgatctggcctctttgttgtttgacgccaaagccgatatt
cccagcgaggtgcggcagcaattattagaagaatatctgaaagcgctggaaaattacgtc
cccgtaaaccgcgaaaaatttttgcaatactactatggctatgtgtacatccgcatcatg
caggccctgggcgcgtacggatttagaggtttttacgagcgtaaagagcactttttaaaa
agcgtgccttacgccatccaaaacctggaatggctgcttcacaacgccgacctgcccatc
gacattccacaactgacggctgtgtgggaacaactggtgcgttccagctatttgcggcag
tttggcgatgcccatctgcgcctgacggtgcgcatccagagtttttcgtacaaacgcggc
attcccgtggacgagaaaggccatggcggcggttttgtgttcgattgccgtatgctgccc
aacccaggccgggaagcgcgctacaaaaacctgacaggactggacagaccggttattgaa
tttctgcaaaaagcgccggaggtaaaaacatttcttcaacacgtgcagggcttgctggac
ctgatggtgcccaactatctgcaacgcaattttacggacattatggtcgctttcggctgt
acgggcggacaacatcgctctgtgttctgtgccagccagcttgccgaatatttaaagaaa
aaatacgacatcgacgtgcagctcagacatcgtgaactggaaatgtggcagggagaataa
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