Caldithrix abyssi: Cabys_451
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Entry
Cabys_451 CDS
T04549
Name
(GenBank) peptidoglycan glycosyltransferase
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
caby
Caldithrix abyssi
Pathway
caby00550
Peptidoglycan biosynthesis
caby01100
Metabolic pathways
caby01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
caby00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Cabys_451
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Cabys_451
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
caby01011
]
Cabys_451
Enzymes [BR:
caby01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
Cabys_451
Peptidoglycan biosynthesis and degradation proteins [BR:
caby01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
Cabys_451
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
APF17202
UniProt:
H1XSC6
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All DBs
Position
complement(526396..528258)
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AA seq
620 aa
AA seq
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MRYFDQTQRSRRFLISATFLVISFFILLLGFFNLQVLHRQYYLDISIHNVIRQVKINPVR
GLILDRDGDILVDNRPSFSAALIRAHTADSTINRVAHFLGMNVNDIKARLRKSPRFAPTI
IRRDLDEQTRTLLEENQYFLPGFELILDFKRYYPQEINSPHIFGYIGEVNEREQKQDPRY
ELGDMIGKAGLERYYDIELRGIKGVRYVRVDASGKMLGDYDPELNVPAIHGSDLYLTLDY
DLQKFAESLMIDRRGSLVAIDVRTGGILALVSKPDYDIRALSGKIDADVWKALIEDKAHP
LYSRSIQSAYPPGSTYKIVAAIAALQENIITPSWKAYCPGYFRLGRKVIRCWNPKGHGEL
DLYGAIKNSCNVYFYQLGLKIGLETWSKYSKILGFGQKTGIDLPNENAGLVPTIQYFNRI
YGENGWTRGNLANLAIGQGELLTTPLQIAQFVMILANRGVYYRPHLVDHLYNYQTHKTIY
FPTESRVVSEVSSEVFDIVREGMHQVVNGGTGWLGKVPGIDMAGKTGTSQNPHGEPHAWF
MAFAPYSHPEVAIAVIVENGGSGGGVAAPIARKFLEMYFYNRLIPRPVIKKDTLQVEEGI
NPLPIDSLAPTPILRIPEIH
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgagatattttgaccagacgcagcgttcccgtaggtttttgatttcagcaacgtttttg
gtcatcagttttttcattttactgctcggattttttaacctgcaggtgctgcatcgtcaa
tattatctggacatttccattcacaacgtcattcggcaggtcaagattaatccggtcaga
ggcttgattctggaccgggacggcgacattttagtggacaaccgcccttctttttcggcc
gccttaattcgcgcgcacaccgccgacagcaccatcaacagagtagcccattttttagga
atgaacgtcaatgatataaaagctcgcctgcggaaaagcccccgatttgcccccaccatc
atccgcagagaccttgacgagcaaacgcgtaccctgctggaagagaatcaatatttttta
ccgggattcgaactcatccttgattttaagcgctattatccgcaagaaatcaattcgccc
catatattcggttacattggcgaagtaaatgagagagaacagaaacaggatccgcgttac
gagctgggcgatatgattggcaaagccggtttggaacgctactacgatattgagctgcgg
ggcattaaaggcgtaagatatgtacgggttgacgccagcggcaagatgcttggcgattac
gatccggaactcaatgtgccggccattcacggcagcgacctttacctgacgctcgattac
gacctgcaaaaattcgctgaaagcctgatgatcgaccgacggggttcgctggtggccatt
gatgtgcgaaccggtggcatactggccctggtgagcaaacccgattacgacattcgggcg
ttgagcggaaagattgacgccgatgtatggaaggctttaatcgaagataaagcgcatccg
ctttatagccgctccattcaaagcgcctatccgccgggttctacttacaaaattgtggcg
gcgattgcagctctgcaagaaaacatcatcaccccttcctggaaggcctattgccccggt
tattttcgtctgggccgaaaagttatccgctgctggaatcctaaaggccacggcgagctc
gatttgtacggcgccatcaaaaacagttgtaatgtctatttttaccagctcggtttaaaa
atcggcctggaaacctggtctaaatacagcaaaattctgggcttcggccaaaaaaccggc
atcgatttgcctaacgaaaacgccggactggtgcccaccattcaatattttaatcgcatt
tacggggaaaatggctggaccaggggaaatctggccaacctggccatcggtcagggcgag
cttttgaccacgcccctgcaaattgcgcaatttgtcatgattctggccaatcgcggggtg
tactaccgtccccatctggtcgatcacctttacaactaccagacgcacaaaaccatttat
ttccccacggaatccagagtggtttcggaagtttccagcgaagtgttcgacattgtgcgc
gaggggatgcatcaggtggtcaacggcggcaccggctggctgggtaaagtgcccggcatc
gatatggccggcaaaacgggcacctcgcaaaatccgcacggcgaaccgcacgcctggttt
atggcctttgcgccctattcccatccagaagtggccattgcggttattgttgaaaacgga
ggaagcggaggcggagtggccgcgcccattgcccgcaagtttctggaaatgtatttttac
aaccggttaatacccaggcctgtgatcaaaaaagataccctgcaggttgaagaagggatt
aaccctctgcccatagacagcctggcgcctactcccatactcaggataccggagatacat
taa
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