Caldithrix abyssi: Cabys_487
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Entry
Cabys_487 CDS
T04549
Name
(GenBank) Por secretion system C-terminal sorting domain-containing protein
Organism
caby
Caldithrix abyssi
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PKD_4
PKD
Peptidase_S8
FlgD_ig
MG2
Por_Secre_tail
CHU_C
PKD_3
Peptidase_S8_N
InlK_D3
Y_Y_Y
Motif
Other DBs
NCBI-ProteinID:
APF17238
UniProt:
H1XSF8
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Position
559165..562107
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AA seq
980 aa
AA seq
DB search
MKYFIRFFVLSIFMFSLAAAQQAQIAQVQKPDKQAPRFVGFKEREIVLKVSSAFLERMDK
EQAKRLGITGIASLDRLSRQFDVSSIIQKYPHLQSRFYQGRSIDPRQWFKVKFKADVDAE
QVARAYRRLSGVVDAQPIGIHSVDAALPNDPDFGQQWHLNQSNDHDMDAPEAWEIEDGNE
NIIVAILDTGVRYYHKDLGGANASSSNPEAARGNMWINWAEKNGVSGVDDDGNGFVDDWI
GWDFVDGVNGYPGEDDTTPDNDPRDFNGHGTHTSGIVGAINNNGYAVASAAGGYLNGNQA
ETGNGVKVMALRIGYSGTFFIWEQGYVSMDFAADAFYYAADNGAKIASCSWGSSNTGGLG
DAIDYFLAGDQRLIFKSAGNSDNEETDYMTGRSDIISVAATDANDQKASFSSYGTWVDIS
APGDNIYSTYHDHDNPDTDYVASLSGTSMAAPNAAAVAALIWSRHPDWSASQVKQRLYDT
ADPIDDLNTTYAGKLGAGRVNAYNAVNDGVTPAPTAAFTADPTSGCAPLSVQFTDQSSGD
ITSYSWDFGDGTTSTAQNPQHTYNNPGTYTVSLTVSGPGGSDTETKVDYITVYEPITADF
SGTPTSGDAPLSVSFTDQSTGTVTAWSWDFGDGATSTEQNPTHTYNTAGTYTVTLTASNS
CDSDTQTKVDYITVTEPTGNPPVADFSGTPTSGDAPLTVNFTDLSSNNPTSWSWDFGDGG
TSTQQNPTYTYNAPGTYTVSLTATNAYGSDTNTKTNYITVTEASQPTMHVNQVNVTKETF
WIITRGKAEIQIVDASGVGVDNATVDGTWSGGTSGSSSVTTNADGWATSYSSWVLGDAEF
TFCVDNVSKSGWQYDAAANVEECGSTTDATAKVVQLTNIKLEDIELQSDIQFASNAPNPF
NPTTTITFFVPEVSNVSVDVYNLLGQKVNTLFNGPASVGLQQVKWNATNFSGNKVPSGVY
FYQITYDQKFKIRKKILLIK
NT seq
2943 nt
NT seq
+upstream
nt +downstream
nt
atgaagtattttattcgtttttttgtcctgagtattttcatgtttagccttgctgccgcg
cagcaggcgcaaattgctcaggtgcaaaaaccagacaaacaggctccgcgttttgtcgga
tttaaagagcgcgaaatcgtgcttaaagtgagttcggcgtttctggagcgcatggataaa
gagcaagctaagcgtctgggcattaccggcattgcgtcgttagaccgccttagccggcag
tttgacgtgagctccatcattcaaaaatatccccacctgcaatctcgtttttatcaggga
cgctccatcgatccgcggcagtggtttaaggtaaagtttaaggcggatgtggacgcggaa
caggtggcccgcgcctatcgtcgtctttccggcgttgtggacgcccagcccattggcatt
cattcggtagatgccgcactgcccaacgaccctgattttggccagcaatggcatctgaac
cagagcaacgatcacgacatggacgcccccgaagcctgggaaattgaagacggcaacgaa
aacatcatcgtggccattctcgatacgggcgttcgctattaccacaaagacctgggcggc
gccaatgcctcttcgtccaatcccgaagcggccaggggcaacatgtggattaactgggcc
gaaaagaatggcgtaagcggcgtggatgacgatggcaacggttttgtggatgactggatt
ggctgggattttgtggacggcgtaaacggttacccgggcgaagacgataccacgccagac
aatgatccgcgcgattttaacggtcacggcacccatacttccggcattgtgggcgccatt
aacaacaacggctacgcggtggcttctgcggcaggcggttacttgaacggcaatcaggca
gaaaccggcaacggcgttaaagtgatggccctgcgcatcggttactcgggcacctttttc
atctgggagcaaggctatgtgagcatggattttgccgcggacgctttttattacgcggct
gacaacggagcaaaaatcgcgtcctgcagctggggttcctctaataccggcggccttggc
gacgccatcgattactttctggccggcgatcagcgtttgatttttaaatccgccggcaat
agcgacaacgaagaaaccgattacatgaccggacgcagcgatattatttccgttgccgcc
accgatgccaacgaccaaaaggccagcttttccagctacggcacgtgggtggatatctcg
gcgccgggagacaacatttattctacctatcacgaccatgacaatcccgacaccgattat
gtggcttctttaagcggcacctcaatggcggcgcccaacgcggctgccgtggctgcttta
atctggtccaggcatccggactggtctgcctcgcaggttaaacaacgcctgtacgacacg
gccgatcccatcgatgatttaaatacgacctatgccggcaaactgggcgcaggacgcgtt
aacgcctacaacgcagtaaacgacggggtgactccggctcccacggccgcctttactgcc
gaccccacaagcggctgcgcgccgttaagcgtacagtttaccgatcagtccagcggcgac
atcaccagctacagctgggattttggcgatggaacaacttctaccgcacaaaatccgcaa
cacacctacaacaatcccggcacctacacggtttcgctgacggttagcggcccgggcggc
tcagatacggaaaccaaagtggattacattaccgtttacgaaccgatcacggccgatttt
agcggaacgcccacatccggcgacgcgccgctgagcgttagttttaccgaccagtccacc
ggcacggtaacggcctggagctgggactttggcgacggcgctacttccaccgaacagaat
ccaacgcacacctacaacaccgcgggaacctacaccgttacgctaaccgcctctaattcc
tgcgattcggacacgcaaaccaaagtggattacatcacggttaccgaaccgacgggcaat
ccgccggtggccgattttagcggtacgcccacatccggcgacgccccgttaacggtaaac
tttaccgatctctccagcaataatcctacttcctggagctgggatttcggcgatggcggc
acatccacgcagcaaaatcctacttacacttacaatgcgccgggtacgtacacggtttcg
cttaccgccaccaacgcctacggttcggataccaacaccaaaaccaattacattaccgtt
accgaagccagccagccaaccatgcacgtcaatcaggttaatgtaaccaaagagaccttc
tggattattacgcgtggcaaagcggaaattcagatcgttgatgccagcggcgtcggcgtg
gacaatgccaccgttgacggcacatggagcggcggaaccagcggatcaagctcggttacc
accaatgccgacggctgggccacctcctattcgtcctgggtactgggagatgcggagttc
acgttttgtgtggataacgtgagcaaatcgggctggcagtacgatgccgccgccaatgtg
gaagagtgcggaagcaccaccgatgcgacggctaaagtggttcaacttacaaacatcaag
ctggaagatatcgaattacagtccgatatccagtttgcctctaacgcgcccaatccattt
aatcctacaaccaccattaccttctttgtgcccgaagtaagtaacgttagcgtggatgtg
tacaatctgctgggccaaaaggtgaacacgttgtttaatggacccgcttcagtagggttg
cagcaggttaaatggaacgctactaattttagcggtaataaggtgccctcgggcgtctat
ttttatcagattacttatgatcaaaaattcaagatccggaaaaagattttactgattaaa
taa
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