Caldithrix abyssi: Cabys_535
Help
Entry
Cabys_535 CDS
T04549
Name
(GenBank) geranylgeranyl diphosphate synthase, type I/geranylgeranyl diphosphate synthase, type II
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
caby
Caldithrix abyssi
Pathway
caby00900
Terpenoid backbone biosynthesis
caby01100
Metabolic pathways
caby01110
Biosynthesis of secondary metabolites
Module
caby_M00364
C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:
caby00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
Cabys_535
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
caby01006
]
Cabys_535
Enzymes [BR:
caby01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
Cabys_535
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
Cabys_535
2.5.1.29 geranylgeranyl diphosphate synthase
Cabys_535
Prenyltransferases [BR:
caby01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
Cabys_535
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
polyprenyl_synt
COG4_m
FUSC
Motif
Other DBs
NCBI-ProteinID:
APF17286
UniProt:
H1XSY0
LinkDB
All DBs
Position
complement(621526..622479)
Genome browser
AA seq
317 aa
AA seq
DB search
MSQQAKIFFNDLKPLLDQFQERLVAIGQKHQVPLFYEPIQYVLTLPGKRIRPLLTILANQ
TCGGRLNSALYPALAVELLHNFTLVHDDIMDNDALRRGQPTVHKKWDVATAILAGDGLMG
LAFKKLLEAPEGDLLTMMRRFTDVMLIICEGQGLDKMFETQSEVSEEQYLEMIRRKTAVL
IELSCELGALSASAAAENIERFRQFGYNLGMAFQIQDDVLDIMADESKLGKTVGSDWQMH
KQTVLSIRLRRELRQKVDDLTFEEFKRALNETGILNQVQNMYRDFFNRARQALKELPQNE
SNQKLQELTDLIQNRCW
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcaacaggcaaaaatttttttcaatgatttaaaacctttgctcgatcaatttcag
gagcgcctggtggccatcggtcaaaaacatcaggtgcctttattttacgagccgattcaa
tatgtgctgaccctgccgggcaagcgaattcggccgctgctaaccattctggccaatcag
acctgcggaggtcgtttaaacagcgctctttaccccgctctggccgtggaattgctgcac
aactttaccctggtgcacgatgatattatggataacgacgctctgcggcgcggtcagccc
accgtccataaaaagtgggacgtggccaccgccattctggccggtgacgggctgatgggc
ctggcctttaaaaagctgctggaagcgccggaaggagaccttttgaccatgatgcgtcgc
tttaccgacgtgatgcttatcatttgcgaaggccaggggctggacaaaatgttcgaaacg
caatccgaggtgagcgaagagcaatatctggaaatgatccgcagaaaaaccgctgtattg
atcgaactttcctgcgagctgggcgcgctttcggccagcgccgcggcggaaaacattgaa
cgctttcgacaattcggctacaatctgggcatggcttttcaaatccaggacgacgtgctg
gacatcatggccgacgagtccaagctgggcaaaacggtgggcagcgactggcaaatgcac
aaacaaaccgttttatccatccgcctgcgccgcgagctgcggcaaaaggtggacgacctg
actttcgaagaatttaaacgcgctctgaacgaaacgggaattttaaaccaggtgcaaaac
atgtatcgtgattttttcaacagagcccgtcaggctttaaaggaactgccgcagaacgaa
agtaatcaaaaactgcaagaactgacggatttgatccaaaaccgctgctggtaa
DBGET
integrated database retrieval system
