Caldithrix abyssi: Cabys_578
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Entry
Cabys_578 CDS
T04549
Symbol
valS
Name
(GenBank) valS valyl-tRNA synthetase
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
caby
Caldithrix abyssi
Pathway
caby00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
caby00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Cabys_578 (valS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
caby01007
]
Cabys_578 (valS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
caby03016
]
Cabys_578 (valS)
Enzymes [BR:
caby01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
Cabys_578 (valS)
Amino acid related enzymes [BR:
caby01007
]
Aminoacyl-tRNA synthetase
Class I (U)
Cabys_578 (valS)
Transfer RNA biogenesis [BR:
caby03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
Cabys_578 (valS)
Prokaryotic type
Cabys_578 (valS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
Val_tRNA-synt_C
tRNA-synt_1_2
tRNA-synt_1e
DUF6779
DUF5915
Peptidase_S49
Motif
Other DBs
NCBI-ProteinID:
APF17329
UniProt:
H1XT17
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All DBs
Position
complement(671976..674666)
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AA seq
896 aa
AA seq
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MGKEIPKVYDPKKVENKWYDHWLQKRYFHAEVNPRKKPFTIVIPPPNVTANLHMGHAFNN
TIQDILIRYHRKLGYETLWLPGTDHAGIATQSVVERELLKEGKSRYDLGREKFVEKVWEW
KEKHGSTIIHQLKMMGASCDWDRERFTLDEGLSNAVQEVFIRLYNKGLIYKGLRIVNWDP
ASATALADDEVEHKEVQGKLYHIRYKVKDSDEYIVVATTRPETLLGDTAVAIAPDDMEKY
HLLGKKIIIPFVNREVELVVDDHVDKEFGSGFVKVTPAHDPNDFEIGQRHQLPMVLMLDK
DGKVLHRCLLFKDGEYVEELPIPDYLAGKDRFEAREIIVEKLKEMGQLEKVEPHVHSVGH
SYRSKVPIEPYLSVQWFVKMKPLAEKALKVVKEGKIKFHPEGRFEKTYEHWMTHIRDWCI
SRQLWWGHRIPAWYNEKGEVKVCKEDPSTPDEKWTRDPDVLDTWFSSQLWPFSTLGWPDD
TPELKYFYPTDVLVTGPDIIFFWVARMIMAGLEFMHEIPFKHVYFNGIVRDEQGRKMSKS
LGNGIDPLDMIEQYSADAVRFTLIMLSSEGQDINLGERSFEIGRNFSNKVWNAFRFLAMN
SDQRWDTDFQKYEAHFTFEDRWIVSRFQKAIEGVSQGIENFRVNDALNAIYHFFWDEYCD
WYLEMIKRRLYQSNNEIERKTALSVAAYIMKSSMELLHPFIPFITEEIWQNLRSEEEESI
VISPWPEVKKSLINEQIEEQMRFVQEAISAIRNLRAEMNVQPAQKINVYYSANAGRSQLI
QTNRAHFAALAKVETLSPLPENFDRAEAGVVVVQSTEFFIPLREALDLDKEKERLQKEIK
RLEGLEKSCLAKLNNENFLQKAPEKVVQAERNKLANIQENLDKVRRNYEKLFGSKS
NT seq
2691 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaggaaataccgaaggtatatgatccgaaaaaggttgagaataaatggtacgac
cactggctgcaaaaacgttatttccacgcggaggtcaatccgcgcaaaaaaccgttcacg
attgtaattccgccgcccaatgtgacggccaacctccacatggggcatgcttttaataac
accattcaagatatcctgattcgctaccaccgcaagttgggctacgaaaccctgtggctg
ccaggcaccgatcacgctggcattgccacgcaaagcgttgtggagcgcgaactgctcaaa
gaaggcaaatcgcgttacgacctggggcgagaaaagtttgtcgaaaaggtctgggaatgg
aaagaaaaacacggttcgaccatcatccaccagttaaagatgatgggcgcttcctgcgac
tgggaccgcgagcgattcacattggatgaaggtctttccaatgcggttcaggaggtgttc
atccgcctgtacaacaaggggctgatttacaaaggactgcgcattgtaaactgggacccg
gcctcggctaccgctctggccgacgacgaggtggaacacaaagaggtacaggggaagctt
taccacatccgctacaaagttaaggactccgatgagtacatcgtggtggccaccacgcgc
cctgaaaccctgctgggagacacggccgtagccattgcgcctgacgatatggaaaagtac
catttgctgggcaaaaagatcatcatcccctttgtgaatcgcgaagtcgaattggtagtg
gacgatcacgtggataaagaatttggttccggctttgttaaagttaccccggcccacgac
cccaacgatttcgaaatcggtcagcgccaccagctgcccatggtgctcatgctggataaa
gacgggaaggttctccaccgctgtctgctgttcaaagacggcgagtatgtggaagaattg
cccattccggactatctggccggcaaggatcgctttgaagcgcgggaaatcatcgtggaa
aaactaaaagagatggggcagctggaaaaggtggaaccccatgtgcattccgtgggacac
agctatcgatccaaggtgcctatcgagccttacctttcggtgcagtggttcgttaaaatg
aagcctctggccgaaaaagccttaaaagtcgtcaaagagggaaagatcaaatttcaccct
gaaggacgctttgaaaaaacgtacgagcactggatgactcatattcgcgattggtgcatc
tcgcgccagttgtggtggggccaccgcattccggcctggtacaacgaaaaaggcgaggta
aaggtttgtaaagaagatccttccacaccagacgaaaagtggacgcgcgaccccgatgtg
ctggacacctggttttcatcacagctgtggcctttttctaccctgggctggcccgacgac
acgccggagcttaaatatttttacccaaccgatgtgctggtcaccggcccggacatcatc
ttcttttgggtggcgcgcatgattatggccggcctggagttcatgcacgaaattcctttt
aaacacgtgtactttaacggcatcgtgcgcgacgagcagggacgcaaaatgagcaagtcg
ctgggcaacggcatcgatccgctggacatgatcgaacagtacagcgcagacgccgtgcgc
ttcaccttaatcatgctcagttcggaaggccaggatatcaatctgggcgaacgcagcttc
gaaataggacgaaatttttccaacaaagtgtggaatgccttccgctttttagccatgaac
tccgatcagcgctgggacaccgatttccagaaatatgaagcgcactttacctttgaagac
cgctggattgtgagtcgctttcagaaagcgatcgagggtgtttcgcagggcatagaaaac
tttcgcgtaaatgatgcgttaaacgccatctaccattttttctgggatgaatactgcgac
tggtatctggaaatgatcaaacggcgcctgtatcagtcaaacaacgaaatagaacgaaaa
acggcgctgagcgtggccgcttacatcatgaaaagctccatggagctactgcacccgttc
attccttttattacggaagagatctggcagaatttgcgcagcgaagaggaagaaagcatc
gttatttcgccatggccggaggtcaaaaaatcgttgattaacgaacagattgaagagcag
atgcgctttgtgcaggaggccatcagcgccattcgcaatctacgggcagagatgaatgtg
cagccggcgcaaaaaatcaatgtgtactattcagcaaacgccgggcgcagtcagttaatc
caaaccaaccgcgcccattttgcagccctggccaaagtcgaaacgttaagccccctgccc
gaaaattttgaccgggcggaggccggcgttgtggtggtgcaatccaccgagttctttatt
cctttgcgcgaggcgcttgatctggacaaagaaaaagaacgtctgcaaaaagagattaaa
cggctggaaggtctggaaaaatcttgcctggccaagctgaacaacgaaaactttttacaa
aaagcgccggaaaaggtggtgcaagccgagcgcaataaactggccaatattcaagaaaac
ctggataaagtcaggagaaattatgaaaaactatttggctctaaaagttag
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