Caldithrix abyssi: Cabys_585
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Entry
Cabys_585 CDS
T04549
Name
(GenBank) Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
caby
Caldithrix abyssi
Pathway
caby00061
Fatty acid biosynthesis
caby00071
Fatty acid degradation
caby01100
Metabolic pathways
caby01212
Fatty acid metabolism
caby02024
Quorum sensing
caby04146
Peroxisome
Module
caby_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
caby00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Cabys_585
00071 Fatty acid degradation
Cabys_585
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Cabys_585
09145 Cellular community - prokaryotes
02024 Quorum sensing
Cabys_585
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
caby01004
]
Cabys_585
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
caby04147
]
Cabys_585
Enzymes [BR:
caby01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Cabys_585
Lipid biosynthesis proteins [BR:
caby01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Cabys_585
Exosome [BR:
caby04147
]
Exosomal proteins
Exosomal proteins of breast milk
Cabys_585
Exosomal proteins of breast cancer cells
Cabys_585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
Motif
Other DBs
NCBI-ProteinID:
APF17336
UniProt:
H1XT22
LinkDB
All DBs
Position
683424..685019
Genome browser
AA seq
531 aa
AA seq
DB search
MAENSLTIPAILESNFSRSSTRVIFNFPDGSSATFAVFYNRVELLSEFLLRNGIKKGDCV
AILDSRFTNLPIIYFALAQIGAITIPIVPALSDEDLHFFLKQNRIVAVFAAQEIKPRIKQ
HSYHHLKFFIDIHSFKFESLQEDTVSEKFEKEIHKIKKAALELVKAEEVIPPPQIEEDDE
IQRLILPDLHGKWQFYRYNHKHLISSASIASETIGLNAESKVLLLLPFYFNLTFSLGVLG
TILKGYQVVFGAQPQTLGELADLIKRYQPTHVLLESGLLERILKPQLQAVGRRSILKTSL
KIFSFLKDKITGGKLDFMKQVEWLISANLTPLNRSCNQFLLKNKIRHHLLFGIFETTSVL
LSGKAVEDFCWIKGQLVRDMEAKIEEGERPGGALWVKGPNVLKSDPTTDFSRTPLIAEPA
EEAFKILGFHSTIIEFASGFKLDARVVEASLRELEEIVEVLIFKHNDELVLKVLPNPELM
SLNEGELEAHLIKKIQNHLAGQFPFPVEISRISIERQPFPKTYLGQLLRIE
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaaatagtttgaccatcccggctattttagaaagcaatttttccaggagttcc
accagagtaatttttaattttcccgatggaagttcggcaacatttgcggtcttttacaat
cgggtggaactgttaagcgagtttctattaagaaatggcatcaaaaaaggggattgtgtt
gccattctggacagccgttttaccaatttaccgatcatctattttgcgcttgctcagatt
ggcgccattaccatacccattgtgccggcgctctcggatgaagatttgcatttcttttta
aagcagaaccggattgtcgctgtatttgccgcgcaagaaattaagccccgaataaaacaa
catagctaccaccacttgaaattttttattgatattcattcctttaagtttgaatcgttg
caggaagatacagtatctgaaaaatttgaaaaagaaatccataaaataaaaaaggcggcc
ctggagctggttaaagcggaagaagttattccgcccccgcagattgaagaggacgatgaa
attcaacgtcttattttgcccgatttacacggaaagtggcagttttaccggtacaaccat
aaacacctgatctcatcggccagcattgccagcgaaaccatcggcctgaacgcagagagc
aaagtgcttttgcttttgccgttctattttaatttgacgttttcgctgggcgttttggga
accattttaaagggctatcaggtggtctttggcgcccaaccgcaaacgctcggagaactg
gctgatctaatcaaacgctaccagcccacgcatgtgcttctggaaagcggcctgttagaa
agaattttaaagccacaactccaggcggttggacgccgatccattttgaaaacttcgcta
aagatattttcatttttaaaagataaaattaccggcggcaaactggattttatgaaacag
gttgagtggctaatttctgcgaacttaacaccgctcaaccgttcctgtaaccaattttta
ctgaagaataaaatacggcaccatctactttttggcatatttgaaacaacctcggttttg
ctaagcggaaaagccgttgaagatttttgctggatcaaaggacaactggttagagatatg
gaggccaaaatagaagaaggtgaaaggccgggcggcgcattgtgggtaaaggggccgaat
gtgttaaaaagcgatccgaccactgactttagcagaacgcctctgattgcggaacctgcc
gaagaagccttcaaaattttaggattccattccaccattattgaattcgcgtcgggattt
aaactggacgctcgcgttgtggaggcctcgctgcgtgaattggaagagattgtagaggtc
ttgatttttaaacacaatgacgagcttgttttaaaagttttgcccaatccggaattaatg
agtctcaatgagggcgaactggaagcccatttaatcaaaaagatacaaaatcatcttgcc
ggacaatttccgtttccggtagaaatctcaagaatctctattgaacgacaaccgtttccc
aaaacctacctggggcagttgttacgaattgagtga
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