Caldithrix abyssi: Cabys_718
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Entry
Cabys_718 CDS
T04549
Symbol
serS
Name
(GenBank) serS seryl-tRNA synthetase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
caby
Caldithrix abyssi
Pathway
caby00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
caby00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Cabys_718 (serS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
caby01007
]
Cabys_718 (serS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
caby03016
]
Cabys_718 (serS)
Enzymes [BR:
caby01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
Cabys_718 (serS)
Amino acid related enzymes [BR:
caby01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
Cabys_718 (serS)
Transfer RNA biogenesis [BR:
caby03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
Cabys_718 (serS)
Prokaryotic type
Cabys_718 (serS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
EzrA
Laminin_I
FapA
FlgN
BRX_N
Mis12
ATG16
NPV_P10
DUF7365
Geminin
PCRF
Sec2p
Peptidase_S64
Motif
Other DBs
NCBI-ProteinID:
APF17469
UniProt:
A0A1J1C459
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All DBs
Position
831728..833131
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AA seq
467 aa
AA seq
DB search
MVPGQEKNFSLKGIGLLWINAFCKFVGNLKAEPQQIEESFMLDLKFIRENPETVKKGIQA
KGEMGDVDRILELDQRRRQIIQEVENLKKQRNENSKKVAQYKKEGKDAAEIIEHTRQISE
TIKGLDEELKELEEQLSEQLSRIPNLPHPSTPIGTDASENVEVNQWGELPQFEFTPRNHL
EIGERLDILDFKRGGKVTGSGFPVYKGDGARLERALINFMLDFHIEKHGYTEIFPPFLAN
RESMYGTGQLPKLEEDMYLAEKDDLFLIPTAEVPVTNLHRGEILDGADLPIKYVAYSACF
RREAGSYGKETRGFLRVHQFNKVEMVNFVHPDKSYEFHEQLLREACEILEALELPYRVLL
LCSGDLSFAAAKCYDIETWSPAEQKWLETSSVSNFEDFQARRANIRFRPEKGAKPMFVHT
LNGSGLATSRLMVSLLETYQTDEGTVIIPEVLRKYMGGQDVIKRKYK
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
ttggttcccgggcaagagaaaaatttttccctaaaagggatcggcttgctatggattaac
gccttctgtaaatttgtgggcaatttaaaagcagagccacagcaaatagaggaaagtttt
atgttagatttaaaattcatccgcgagaatccggaaacggttaagaaagggattcaggcc
aaaggcgaaatgggcgatgtggatcgcattctggagctggatcagcgccgccggcagatt
attcaggaagtagaaaacttaaaaaagcagcgtaatgaaaattcaaagaaagttgcccaa
tacaaaaaagaaggtaaagatgcggcggaaatcatcgaacatacccggcaaatcagcgaa
accatcaagggactggatgaggagctgaaagagcttgaagaacaactaagcgaacagtta
agccgcattcccaacctgccccatccatccacgcccatcggtacggatgccagcgaaaac
gtggaggtcaatcagtggggcgaacttccgcagtttgagtttactcctcgcaatcatctg
gaaattggcgaacgactggatattctggattttaaacgcggcggcaaggtcaccggaagc
ggatttccggtttacaaaggggacggggcgcgtctggagcgggcgcttatcaattttatg
ctcgactttcacatcgaaaagcacggctacaccgaaatatttccgccctttctggccaat
cgtgaaagcatgtatggcaccggccagttgcctaaattagaagaggacatgtatctggct
gagaaagacgatctgtttttaattcctaccgccgaagtgccggtaaccaatctgcatcgc
ggcgaaattttagatggcgccgatctgcccatcaagtacgtggcctattcggcctgtttt
cggcgcgaggccggttcttacggaaaagaaacgcgcggcttcttacgcgtccatcagttt
aacaaagtagaaatggttaactttgtccatccggataagtcttacgaatttcatgaacaa
ctattgagagaagcgtgcgaaattttagaagcgctggagcttccctaccgcgtgcttttg
ctctgctccggcgatttgagttttgccgcggccaagtgttacgacattgaaacctggtcg
ccggccgaacaaaagtggttagagacctccagcgtcagcaattttgaagattttcaggcg
cgccgggctaacattcgcttcaggccggaaaaaggcgccaagcccatgtttgtccatacc
ttaaatggttcgggattggccacgtcacggctcatggtttctttgctggaaacgtaccag
accgatgaaggaacggtcatcattccggaagtactgcgcaaatacatgggcggccaggat
gtaatcaaacgtaagtacaaataa
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