Caldithrix abyssi: Cabys_743
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Entry
Cabys_743 CDS
T04549
Name
(GenBank) alanine racemase
KO
K01775
alanine racemase [EC:
5.1.1.1
]
Organism
caby
Caldithrix abyssi
Pathway
caby00470
D-Amino acid metabolism
caby01100
Metabolic pathways
caby01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
caby00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Cabys_743
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
Cabys_743
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
caby01011
]
Cabys_743
Enzymes [BR:
caby01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.1 alanine racemase
Cabys_743
Peptidoglycan biosynthesis and degradation proteins [BR:
caby01011
]
Precursor biosynthesis
Racemase
Cabys_743
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ala_racemase_N
Ala_racemase_C
Arteri_nsp7a
Motif
Other DBs
NCBI-ProteinID:
APF17494
UniProt:
H1XUA4
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All DBs
Position
862984..864099
Genome browser
AA seq
371 aa
AA seq
DB search
MGPTRAYIDHRNLIHNLTLIQKAVAPATVMGVVKAEAYGHGSIEAARTLLANGVNYLGVA
FPEEGIKLRKAGIDVPILVFGAHLPHFFPQFLDYKLDITLTDVEQLEPLRALCRKYGLRP
RVQIKIDTGMGRVGFLFDRQQDLIFKIIEEPAWQVVGVYSHLSSADEEDTTFTLQQIKEF
SRIKSVIQQKYPELNALFHLANSAAIMRFKESYFDMVRPGVMLYGNPPSPAFNLQWPLKE
VMAFKSKLTLIKKLDAHQPVSYNRRYYTPRPTYIGLVPAGYADGYNRKFTNRGQVLIRGK
RYPVVGTVCMDQFLVDLGPRLNGVKVGDEVVLFGKQENAHIKIIEISEKLETIPYEVTCW
VSGRVPRIHLK
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgggaccaaccagagcttatatcgatcatcgtaacttgattcacaatttaactttgatt
caaaaggcggtggctccggcgactgtgatgggcgtggttaaagccgaggcttacggccat
ggcagcattgaagcggccagaaccctgctggctaacggcgttaactatttaggcgttgcc
tttccggaagaaggcatcaaattgcgcaaagccggcattgacgtgcccattcttgttttt
ggcgctcatctgcctcatttctttccgcagtttctggattacaagctggacattacgtta
acagacgtggaacaactggaacccttacgcgccctgtgtcgcaaatacggcctgcggccg
cgcgtgcaaattaaaatagataccggcatgggccgcgtgggatttctttttgaccggcaa
caggatttgatttttaaaattattgaagagcccgcctggcaagtggtgggcgtttattct
catctttccagcgccgacgaagaagatacaacgtttacgctccagcagatcaaagaattc
agcaggattaaaagcgtcattcaacaaaaataccccgaattgaatgcgctgtttcatctg
gccaattcggcggccatcatgcgctttaaagaaagttattttgacatggttcgtccgggc
gtgatgctttacggcaatccgccttctcctgcttttaacctgcagtggcccttaaaagag
gtgatggcttttaagtctaaactaacgctgataaaaaaattggacgcccatcaaccggtg
agttacaatcggcgctactacacgccgcggccgacctatattggcctggtgccggctggt
tatgccgacggctacaaccgaaaattcaccaatcgaggacaggtattgattcgcggaaag
cgttacccggtggtgggcaccgtttgcatggatcagtttttagttgatctggggccgcgt
ttaaatggcgttaaggtgggcgacgaggtggtgctttttggaaaacaggaaaacgcgcac
attaaaatcatcgaaatttctgaaaaacttgagaccatcccttacgaggtgacctgttgg
gtttcgggacgcgtgccgcgcatccatctgaaatag
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