Caldithrix abyssi: Cabys_750
Help
Entry
Cabys_750 CDS
T04549
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
caby
Caldithrix abyssi
Brite
KEGG Orthology (KO) [BR:
caby00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
caby03016
]
Cabys_750
Enzymes [BR:
caby01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
Cabys_750
Transfer RNA biogenesis [BR:
caby03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
Cabys_750
Prokaryotic type
Cabys_750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
APF17501
UniProt:
H1XUA9
LinkDB
All DBs
Position
868598..869605
Genome browser
AA seq
335 aa
AA seq
DB search
MTIYHWLLGQPYQDNALFVKIDEGQSIYRLLFDCGENTISNLPQTEIMRIDHLFFSHFHL
DHVADLDRFIRLNYNRPEKPVHIWGPPGTLEKIFNRLNSFTWNLLSDAGARWFIHEAGEG
SLKHFLLLARDQFKKAYLQKKEPVADAILSLPAFKVFAATLDHKIPVLGFKVTETPRKKI
NVAQLEQLRLPPGPWIKTLKDDAVADEKELKINGRRYNVGFLRKELLTILRGNSLCYLTD
FIFPQNDGGRLIQWIKNCDVLYCESQYLAEDLPLAEKNFHLTVQQAARLANQANVGKLFI
FHFSQRYKDLPPLTFLKQAQMTFRRSFLPGPWEKI
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgacgatttatcactggcttttaggccaaccttaccaggacaatgcgctttttgtcaaa
attgacgaaggccagagcatctatcgtttacttttcgattgcggagagaacacgatctct
aatctgccgcaaacggagataatgcgcattgatcatttgtttttttcgcattttcatctg
gatcacgtggccgatttagaccgcttcatccgtctgaattacaatcgtccggaaaagccg
gttcacatctggggaccgccgggaacgctggaaaaaatctttaaccgcttaaatagtttt
acgtggaatttactttccgatgccggagcccgctggtttatccacgaagcaggggaaggt
tcgctgaaacattttttactgttggcgagagatcaattcaagaaagcgtacttacaaaag
aaagaaccagttgccgacgccattttgagcctgccggcgtttaaggtatttgccgccacg
ctcgaccacaaaatacctgtactcggctttaaagtgacagaaacgccaagaaaaaaaatc
aatgtggcccaactggaacaactacgtttgcctcccggcccctggattaaaaccttaaaa
gatgatgcggttgccgatgaaaaagagctaaaaatcaacggtaggcgctataatgtcggt
tttttaagaaaggaattgctgaccattttacgcggcaattccttgtgctatttaaccgat
ttcatctttccgcaaaatgacggtggacgtttgattcagtggataaaaaattgcgatgta
ttgtattgcgagtcgcagtatctggcggaagatttgcctcttgccgaaaaaaattttcat
ttaacggtacagcaggcggcccggttggctaaccaggcaaacgtcggcaaactttttatc
tttcatttttctcaacgctacaaagatttacctcctcttacatttttaaagcaggcgcaa
atgacgtttcgccgcagctttctgcccggcccctgggaaaagatttaa
DBGET
integrated database retrieval system
