Caldithrix abyssi: Cabys_965
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Entry
Cabys_965 CDS
T04549
Name
(GenBank) tRNA (mo5U34)-methyltransferase
KO
K15257
tRNA (mo5U34)-methyltransferase [EC:2.1.1.-]
Organism
caby
Caldithrix abyssi
Brite
KEGG Orthology (KO) [BR:
caby00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
caby03016
]
Cabys_965
Transfer RNA biogenesis [BR:
caby03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
Cabys_965
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltransf_9
Methyltransf_23
Methyltransf_11
Methyltransf_25
Methyltransf_31
Methyltransf_12
NpmA
CMAS
Motif
Other DBs
NCBI-ProteinID:
APF17716
UniProt:
H1XW26
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All DBs
Position
complement(1132516..1133496)
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AA seq
326 aa
AA seq
DB search
MIDYTAFLDLLTEFEEIPRAWKDTLAQQIKRALQPAGNRDIAGWEEIIAHLPSARPSQIA
LNRAVIQIGKKDDLDDQTRDHLEKLLRRLHPWRKGPLSFFDIFIDTEWRSDWKWERLKDH
IEPLRQRLVLDVGSGNGYFCWRMRGAGARLVIGIDPYLKYVYQFAAMQKYINDPAVQVLP
LGIDDLPESLQCFDTVFSMGVLYHRRSPFDHLFKLKGLLKSGGQLVLETLVIEGENGQVL
VPQGRYAKMRNVWFIPSAPTLQNWLKRAGFHDIRLIDVSLTTTDEQRSTDWMQFESLPDF
LNPADNKYTIEGYPRPRRAIFLAKRP
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgatcgactacaccgcttttctggatttgcttacagagtttgaagaaatcccccgcgcc
tggaaagacacgctggcgcaacaaattaaacgggccttacagccggcaggcaaccgggac
atcgccgggtgggaagagatcatcgcccatttaccctccgcccgcccttcgcaaatcgct
ttaaacagagcggtaattcagatcgggaaaaaagacgatctggacgaccagaccagagac
catcttgaaaaattgttgcgacgcctgcacccctggcgcaaagggcctctttcttttttc
gatatattcattgacaccgaatggcgttccgattggaaatgggagcgcttaaaagaccat
atcgaaccgctgcggcaacgtcttgttctggatgtgggcagcggcaacggatatttttgc
tggcgcatgcgcggagccggcgcacggctggtcatcggcattgatccttatttaaaatat
gtgtaccagtttgccgccatgcaaaaatacatcaacgacccggctgtacaggttttgccc
ctgggcatcgacgacctacctgaaagcttacaatgttttgacacggtcttttccatgggc
gtgctttaccaccgacgttctccttttgatcatctgttcaaactcaaaggattgcttaaa
tctggcgggcaactggtgctggaaacgctggttatcgaaggagaaaacgggcaggtattg
gtgccgcaaggccgctacgccaaaatgcgcaacgtctggtttattccgtctgcgcctacc
ttgcaaaactggctaaaacgagcgggctttcatgatattcgcttgattgatgttagccta
acgacgactgacgaacagcggtcaacagattggatgcaattcgaatcgttgccggatttt
ttaaatcccgcagataataaatacaccattgaaggctatccgcgtccccggcgcgccata
tttcttgcaaaacgtccctga
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