Clostridium acetobutylicum ATCC 824: CA_C0503
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Entry
CA_C0503 CDS
T00056
Symbol
uvrA
Name
(GenBank) Excinuclease ABC subunit A (ATP-ase), (uvrA)
KO
K03701
excinuclease ABC subunit A
Organism
cac
Clostridium acetobutylicum ATCC 824
Pathway
cac03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CA_C0503 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cac03400
]
CA_C0503 (uvrA)
DNA repair and recombination proteins [BR:
cac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CA_C0503 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CA_C0503 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
RsgA_GTPase
AAA_16
nSTAND3
nSTAND1
AAA_21
AAA_22
NMDAR2_C
AAA_33
NACHT
DnaJ_CXXCXGXG
AAA_23
cobW
ATPase_2
ATPase
Viral_helicase1
GcpE
Zn_ribbon_3
AAA_15
SAB
Motif
Other DBs
NCBI-ProteinID:
AAK78483
UniProt:
Q97LQ1
LinkDB
All DBs
Position
577260..580079
Genome browser
AA seq
939 aa
AA seq
DB search
MKDKIVIKGAKVHNLKNVDLTVPRNEFVVFTGLSGSGKSSLAFDTLYAEGQRRYMESLSS
YARQFLGQMDKPNVEYIEGLSPAISIDQKTTGRNPRSTVGTVTEIYDYLRLLYAKIGVPH
CPNCGKEISQQTVDQIVDSVMKLEERTKIQVLAPVVRGRKGEHTKLIAHIKKSGFVRVRI
DGEVYEIDEDEIKLDKNKKHHIEALVDRIVIKQGVEGRLTDSVETALKLAEGLVVINVMG
KEDMLFSENFACPDCGISIGEISPSMFSFNAPFGKCDVCDGIGTLLEIDEDLVIPDKSKS
IMEGAIAPWGEGRLKEESWTFGVLKALSKKYKLDINKPIEDYDEKTLNILLYGAPDVLKV
NYVKDSQEMVFNHHYEGIINQMKRRYMESNSDYIKSEIENYMSNNPCPKCKGARLKKEVL
AITVGNKNIFEFCSMPIREEVSFIDTLELSNKHKIISAQIVKEIKSRLEFLINVGLDYLN
LAREARTLSGGESQRIRLATQIGSSLVGVLYILDEPSIGLHQRDNDRLIATMKNLKDIGN
TLIVVEHDEDTIKAADFIVDIGPGAGEHGGEIIAAGSLEDIKNCKESITGQYLTGVKKIE
VPKERREAGKNFIEIVGAKENNLKNVNVKFPVGLFTCVTGVSGSGKSTLVNEILYKALNK
KINRSKLNPGKYKSINGIENIDKIIDINQSPIGRTPRSNPATYTGVFDIIRELYASTKEA
KLRGYKAGRFSFNVKGGRCEACKGDGIVRIEMQFLSDVYVPCDVCKGKRYNRETLEIKYK
DKNIDDLLNMTVEDALKFFENLPRIKNKLQTLADVGLGYVRLGQPSTQLSGGEAQRIKLA
YELSKRSTGKTLYILDEPTTGLHTDDVKKLISILQRLTDMGNTVVVIEHNLDVIKCADYI
VDLGPEGGEKGGTILCSGTPEQVAQNSSSYTGQYLKKML
NT seq
2820 nt
NT seq
+upstream
nt +downstream
nt
atgaaagataagatagtaataaaaggcgcaaaggttcataacctaaagaatgtagattta
acggtgccaagaaatgagtttgtagtttttacaggactttcaggttctggtaagtcttct
cttgcctttgatacattgtatgcagaaggacaaagaagatatatggaatccttatcttcc
tatgcaaggcagtttttaggtcaaatggataagcctaatgtagaatacatagaaggtttg
tcaccagcaatttctatagatcaaaagactactgggagaaatccaagatctacagttgga
actgtaacagagatatacgactatttaagacttttatatgctaaaataggagttccacat
tgtcctaattgtggaaaagaaatttctcagcagactgtagatcaaatagtggatagtgtt
atgaaacttgaagaaagaacaaaaattcaagtgcttgctcccgttgttagaggaagaaaa
ggagagcatacaaaattaattgcacatataaagaaaagtggatttgttagagttagaatt
gatggagaagtatatgaaatagatgaagatgaaataaagcttgataaaaataaaaagcat
cacattgaagctctagtagacagaatagtaataaagcaaggtgttgaaggaagacttaca
gattcagtagaaacagcacttaagctagcagaaggacttgttgtaataaatgtaatggga
aaagaagatatgctttttagcgaaaattttgcatgtccggattgcggaataagtatagga
gaaatttcgcctagtatgttctcgtttaatgcaccatttggaaaatgcgatgtttgtgat
ggaataggaactttacttgaaattgatgaggatttagttatccctgataaatcaaaaagc
ataatggaaggtgcaatagcgccttggggagaaggaaggttaaaggaagagtcatggact
tttggtgttcttaaggcgctttcaaagaagtataaacttgatataaataaaccaattgag
gattatgatgagaaaactttgaatatacttttatatggcgcaccagatgtgcttaaggtt
aactatgttaaggattctcaggaaatggtatttaatcaccattatgaaggcataattaat
caaatgaagagaagatatatggagagtaattctgattacataaaatctgaaatagaaaat
tatatgagtaacaatccatgtccaaagtgcaaaggagcaagactaaaaaaagaagtgctt
gcaattacagttggaaacaaaaacatatttgaattttgttctatgccaataagagaagaa
gtatcttttattgatactttagaactttcaaataagcataaaattataagtgctcagata
gttaaggagattaaaagcagacttgaatttttaataaatgttggtttggattacttaaat
cttgctagagaagctagaacactatctggtggtgagtctcaaaggataagacttgcaact
caaataggttcaagtttagttggagttctttatatattggatgaacctagtataggactt
catcaaagagataatgatagacttatagcaacaatgaaaaatcttaaagatatagggaac
acacttattgtagttgaacatgatgaggatacaataaaggctgctgattttattgttgat
ataggtcctggagctggagaacatggaggagaaataattgcggcaggaagcttagaggat
ataaaaaactgtaaggagtctataactggtcaatatttaacgggagttaaaaagatagaa
gttcctaaggagagaagagaagcaggcaaaaactttatagaaattgttggagcaaaggaa
aacaatcttaagaatgtaaatgttaaatttccagtaggattatttacttgtgttacaggt
gtgtctggttcgggaaagagtacacttgtaaatgaaatactatataaagccttaaataaa
aaaataaaccgttcaaagcttaatccaggaaaatataagagcattaacggtatagaaaac
attgataagattatagatataaaccaaagtcctattggaagaacaccgagatctaatcca
gcaacttacacaggagtgtttgacataataagagagctttatgcatctactaaggaggca
aagttaagaggttacaaggctggtagatttagttttaacgtaaaaggtggaagatgtgag
gcttgtaagggtgatggaatagtaagaattgaaatgcagttcttatctgatgtttatgta
ccttgtgatgtttgtaaaggcaagagatataatagggaaacattagaaataaagtataaa
gataaaaatatagatgacttattaaatatgactgtagaggacgcattgaagtttttcgag
aaccttcctagaataaagaataaacttcaaactttagcagatgtagggcttggatatgtg
agacttggtcaaccttctactcagctctcaggtggagaagctcaaagaataaagttggct
tatgaattatcaaagagaagtacaggaaaaacactatatatacttgatgagcctacaaca
ggacttcatacagacgatgttaagaagcttataagtatacttcaaagacttactgatatg
ggaaatacagttgtggttatagagcataatttagatgttataaaatgtgcagattatata
gttgacttaggacctgaaggaggggaaaaaggaggtactatactttgcagtggaacacct
gaacaggtagctcaaaatagttcctcatatacgggacaatatctaaaaaagatgttataa
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