Clostridium acetobutylicum ATCC 824: CA_C1098
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Entry
CA_C1098 CDS
T00056
Symbol
polA
Name
(GenBank) DNA polymerase I, polA
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
cac
Clostridium acetobutylicum ATCC 824
Pathway
cac03030
DNA replication
cac03410
Base excision repair
cac03420
Nucleotide excision repair
cac03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CA_C1098 (polA)
03410 Base excision repair
CA_C1098 (polA)
03420 Nucleotide excision repair
CA_C1098 (polA)
03440 Homologous recombination
CA_C1098 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cac03032
]
CA_C1098 (polA)
03400 DNA repair and recombination proteins [BR:
cac03400
]
CA_C1098 (polA)
Enzymes [BR:
cac01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CA_C1098 (polA)
DNA replication proteins [BR:
cac03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CA_C1098 (polA)
DNA repair and recombination proteins [BR:
cac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
CA_C1098 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CA_C1098 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
HHH_5
HHH_2
DprA_N
UPF0180
Motif
Other DBs
NCBI-ProteinID:
AAK79072
UniProt:
Q97K23
LinkDB
All DBs
Position
1266368..1268983
Genome browser
AA seq
871 aa
AA seq
DB search
MERLLVLDGNSLMNRAFYALPELTNAEGLHTNGIYGFMTMLIKMRDEIKPDYIVTTFDRK
APTFRHKEYEDYKAGRKKMPPELSEQFPVLKELLEKLAINIFEIDGFEADDLIGTLACFA
KEKGIEVYIVTGDKDALQLADDNVKVVINKKGMTEKEIYDKNRMIEEFGVTPVQFIDVKG
LMGDNSDNIPGVPGIGPKTAFKLIQEYGSVENVLDNIQNIKGKKIKENLENYAEQAVFSK
KLATIMTNVPIEIDIEEIRSKESFDVEGARHLLRRLQFKSIIEKIPSLNVEAEKSDFVVE
YNLIDEFPKFHELFSAIKDTEIYMSYSIGNGELYSKIYIDTIFMKVEEKTYIVDLKKIIE
QNREDVLKDLKEFFENKKIAKIIHDSKNMYTVLMKNGIKIENLAFDTAIAEYLINPSKKE
YNLKDAAEEMLLLDLTGEDNDIKIKEVYVMDKIYNKLKDKIKEYDMDELYYKVELPLIEV
LSSMESEGFKVEKNKLQQIGDKFTVEIAKVKDEIYNMAGEEFNISSPKQLGKILFEKLDL
PVIKKTKTGYSTNAEVLEKLMDKHPIIEKVVYYRQLTKLYSTYVEGLKPVIDVDEKIHSS
FNQTVTTTGRLSSTEPNLQNIPIKNEMGREIRKVFVPENDNCIILSADYSQIELRVLAHI
ADDENLINAFKHHSDIHTKTASEVFRVPIEEVTSRMRSNAKAVNFGIVYGISDFSLAQDI
KVSKKEAKEYIDTYFERYPNVKKYLEDIVVTAKKNMYVNTIMNRRRIIPEIASSNKIVKG
FGERLAMNTPIQGSAADLIKLSMVNVYSKIKQLKLKSRLILQVHDELILNVHKDELEKVK
ELVKLEMEEVMELKVPLEVDIESGNTWYEAK
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
atggaaagactgcttgtgttagatggtaatagtcttatgaatagggctttttatgctttg
cctgaacttacaaatgctgaaggactccatacaaatggaatatatggctttatgactatg
cttataaaaatgcgagatgaaataaagcctgattacatagttacaacctttgataggaaa
gcacctacctttagacataaggaatacgaggattacaaggcaggaagaaaaaaaatgcct
cctgaacttagtgagcagtttcctgtattaaaagaattacttgaaaagttagctataaac
atatttgaaatagatggttttgaggccgatgacctcataggaacattagcatgttttgct
aaagaaaagggaatagaagtatacatagttacaggggataaagatgcccttcagcttgca
gatgataatgttaaggttgttataaataaaaaaggaatgaccgaaaaagaaatatacgat
aaaaatagaatgattgaagagtttggtgttactccagttcagtttatagatgtaaaagga
cttatgggagataattctgacaacataccgggagtaccaggaataggccctaagacagcc
tttaagctcatacaagaatacggcagtgtagagaatgttctcgacaatatacaaaatata
aaaggcaaaaaaataaaagagaacttagagaattatgcagagcaagcagtttttagtaaa
aagcttgcaaccataatgactaatgttcctattgaaatagatattgaggaaataagatct
aaagaaagttttgatgttgagggtgctagacatcttttaagaagacttcaatttaagagt
ataatagaaaaaattccaagtcttaatgttgaagcggaaaaaagtgattttgttgtagag
tataatttaatagacgaatttccaaaatttcatgaattattttcagctattaaagatact
gaaatttatatgtcatattctataggaaatggagagctgtattctaagatttatattgat
acaatttttatgaaagtagaagaaaagacatatatagtagatttaaagaaaataattgag
caaaatagagaagatgttctcaaagatttaaaagagttctttgagaataagaaaatagct
aagataatacatgattctaaaaatatgtatacagtgcttatgaagaatggcataaaaata
gagaatctggcatttgatacggcaatagcagaataccttataaatccatctaaaaaagag
tacaatttaaaagacgcggcggaagagatgctcttattggatttgacgggagaagacaat
gatattaaaataaaagaagtttacgttatggataaaatttacaataaacttaaagacaaa
ataaaagaatatgatatggatgagttatactataaagtagagcttccactcatagaagtt
ttatcctctatggagagtgaaggatttaaggttgaaaaaaataaacttcaacaaattggc
gataaatttacagttgaaatagcaaaggttaaagatgaaatatataacatggcaggtgag
gagtttaatataagttctccaaagcaacttggaaaaatattatttgaaaaattggattta
ccagttataaagaaaaccaaaacgggttactccactaatgctgaggttttggaaaagctg
atggataagcatcctataattgaaaaggttgtatactatagacagcttacaaaactctat
tcaacatatgttgaaggacttaaacctgttatagatgttgatgaaaagatacattcaagt
tttaatcaaactgtaactacaacaggtaggctttcaagtacagaaccaaatcttcaaaac
atacctattaaaaatgagatgggaagagaaataaggaaagtttttgtgcctgaaaatgat
aattgtataatactttcagcagactattcccaaatagaattaagagttttagctcatatt
gctgatgatgaaaatttaattaatgcatttaaacatcacagtgatatccatacaaagaca
gcttcggaggtttttagagtacctattgaagaggttacgtctagaatgagaagtaatgca
aaggctgtaaactttggaattgtctatggaataagtgatttcagtctagctcaggatata
aaggtatccaagaaggaagctaaagaatacattgatacttattttgaaagatatccaaat
gtaaaaaaatacttggaggatatagtggttacagctaaaaagaatatgtatgtaaacact
ataatgaacagaagaagaattattccagaaatagcctcatcaaataaaattgttaaaggc
tttggagagagacttgctatgaatacacctatacagggaagtgcagcagatcttataaaa
ctttcaatggttaatgtgtatagtaaaataaagcaactaaagcttaaaagtaggcttata
cttcaagtgcatgatgaactaattttgaatgtacataaggatgaactcgaaaaagtaaag
gaattagtaaaacttgaaatggaagaggttatggaacttaaagttcctttggaagtagat
atagaatcaggaaatacctggtatgaagcaaaataa
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