Clostridium acetobutylicum ATCC 824: CA_C1805
Help
Entry
CA_C1805 CDS
T00056
Symbol
truB
Name
(GenBank) Pseudouridine synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
cac
Clostridium acetobutylicum ATCC 824
Brite
KEGG Orthology (KO) [BR:
cac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cac03016
]
CA_C1805 (truB)
Enzymes [BR:
cac01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CA_C1805 (truB)
Transfer RNA biogenesis [BR:
cac03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CA_C1805 (truB)
Prokaryotic type
CA_C1805 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
UPF0113
Motif
Other DBs
NCBI-ProteinID:
AAK79770
UniProt:
Q97I48
LinkDB
All DBs
Position
1953768..1954637
Genome browser
AA seq
289 aa
AA seq
DB search
MDGILNIFKPIGLTSFDVVRQVKKISKEKKVGHTGTLDPLASGVLPICIGKATKIVDFVM
EGKKIYDAEMKLGEISDTYDREGKILKVNQVTSSENNIVEAIMSFQGEILQVPPMYSALK
VNGIKLYDLARQGIEIERASRKIHIYAIKILSIDIPFVKFRVECSKGTYIRSLCYDIGNK
LGCGALMYNLTRVSSGNFNSSFSIPLEDLNEQNITENIINVDKCLENYDEIAVDEKFEKL
LVNGVKVSDRRLIEKIPDNKTYRVYNMERKFLGLGNLSEEGFKIIKLLT
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atggatggaattttaaacatatttaagccaataggactaacatcctttgatgtagtaaga
caagtaaaaaaaatctccaaagaaaaaaaagtagggcatacagggacacttgatccattg
gcatcaggtgttttgcctatttgcattggaaaagctactaaaattgtggattttgtaatg
gaaggtaagaaaatatacgacgcagaaatgaagctcggtgaaataagtgatacttatgat
agagaaggtaagattttaaaagtaaatcaagttacttcaagtgaaaataatatagttgaa
gctattatgagttttcaaggtgaaattcttcaagtccctccaatgtactcagcactaaag
gttaatggtatcaaattatatgatttagccaggcagggaattgaaatagaaagagcttct
agaaaaatacacatatatgcaattaagattttaagtatagatattccttttgttaaattc
cgtgttgagtgctctaaaggaacgtacataagaagtttatgttatgatataggtaacaaa
ctaggatgtggagcattaatgtacaatttaacgcgagtgtcatccggaaatttcaattct
tcattcagcattccattggaagatcttaatgagcaaaatattacggaaaatataattaat
gttgataaatgcctggaaaattacgatgaaatagcagtagatgaaaaattcgaaaaatta
ttggtaaatggcgtaaaagtatcagacagaagattaattgaaaaaattcctgataacaaa
acttatagagtctataatatggaaagaaagtttttaggtcttggaaatttaagtgaagaa
ggatttaaaataattaaattattaacctag
DBGET
integrated database retrieval system
