Clostridium acetobutylicum ATCC 824: CA_C2130
Help
Entry
CA_C2130 CDS
T00056
Symbol
spoVD
Name
(RefSeq) stage V sporulation protein D
KO
K08384
stage V sporulation protein D (sporulation-specific penicillin-binding protein)
Organism
cac
Clostridium acetobutylicum ATCC 824
Pathway
cac00550
Peptidoglycan biosynthesis
cac01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cac00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CA_C2130 (spoVD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cac01011
]
CA_C2130 (spoVD)
Peptidoglycan biosynthesis and degradation proteins [BR:
cac01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
CA_C2130 (spoVD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PASTA
PBP_dimer
PAS_6
Motif
Other DBs
NCBI-GeneID:
1118313
NCBI-ProteinID:
NP_348748
UniProt:
Q97H83
LinkDB
All DBs
Position
complement(2220690..2222879)
Genome browser
AA seq
729 aa
AA seq
DB search
MPKRILVDKATIRNRIFIVFLILTCVIFLLCYKLFNVMVARSSRYKKMAQEQWTSEVKIS
AKRGRILDRNGEELAISGNVYRVDLDLNTIKNSLAEKKMKMDELADRLSSALDMDKKDVS
KQLNKKFKDGRPMGSAILTRRIDKDKANKVLAINVKGVMVSPDTKRYYPNSDFLSQVIGH
TNSDGDGLTGVELKYNKYLKGKPGVRKAEIDKNSANLPYTISEYSKPLDGRDVVLTIDKN
MQYFAEKYAQEALVNNKAKAVSILIMNPKNGEILAMANKPDYDLNDPWDKSKSYDELQKS
WRNRVVSDAFEPGSIFKVITSSAAMSLGIVHENDKFNCGGSITVAKKTIHCWKRTGHGEE
TFVDILKNSCNVGFAELGERLGAKNLNDYINKFGFGRKTGIDLPGEARGIIRPTNKIGPV
DLATIAFGQSNTVSMVQYMQAFNSVANGGYLITPHVMREISHVENNRQVVDKEYSDYNKK
RILDESMTATLRGYLEKVVSEGGGKKAFIDGYHIGGKTGTAQKPNPNGGGYEHGKYIASF
VGMAPASDPKITVMVSIDEPDPSNYYAGQISAPVGQKVFNDIFNYLGIKPDTSSSDAAKS
MLKDVVIPNIRGMKKEDAIKTLKNLNIDADVDGNGEYVSNTTPIPGITVKEGTKVVLYTG
DSPNYNNNDVIVPNLTGYSKKEAEETLKSLGLDFKISGDGVVESQSIDAGKQVNKGTVLT
LKLEENMSE
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
ttgcccaaaaggatattagttgataaggctactattagaaatagaatttttattgtattt
ctaattttaacttgtgtaatctttttactatgctacaagctttttaatgtaatggttgca
agatcttctaggtataagaaaatggcacaagaacagtggacaagtgaagttaagatttca
gctaaaagaggaagaatattagatagaaatggcgaagaactagccataagtggtaatgtt
tatagagttgatttggatttaaatactataaagaattctttggctgaaaagaagatgaaa
atggacgaacttgcagataggctttctagtgcacttgatatggataaaaaagatgtctct
aaacagcttaacaaaaagtttaaagatggaagaccaatgggatctgcaattttaacaaga
agaatagataaggataaggctaataaagttttagctataaatgtaaaaggagtaatggtt
tctcctgatacaaaaagatattatccaaacagcgatttcttatcacaggttattggacat
actaactcagatggagatgggcttacaggggttgaacttaaatataacaaataccttaaa
ggtaagccaggggttagaaaggctgagatagataaaaatagtgcaaatttaccttacaca
atatctgaatattcaaaaccgttggatggcagagatgttgtccttactatagataaaaat
atgcagtattttgctgaaaagtacgcccaagaggctttagttaataataaagcaaaggct
gtgtcaatacttataatgaatcctaaaaatggtgaaatacttgctatggctaacaagcct
gattatgatttgaatgacccttgggataaaagtaaaagttatgatgaacttcagaaaagt
tggagaaatagagtagtaagtgatgcttttgagcctggatctatatttaaggttataact
tctagtgcagctatgagtttagggatagttcatgagaatgataaatttaactgcggggga
agtattactgtagctaaaaaaactatccactgctggaaaagaacagggcatggagaagaa
acttttgtagatattcttaaaaattcttgtaatgttggttttgctgaactaggagaaagg
cttggagctaaaaatcttaatgattatataaataaatttgggtttggaagaaaaacaggt
atagatctcccaggagaagcacggggaataattagaccaactaataaaataggacctgtg
gatttagctacaatagcatttggacaatctaatactgtttcaatggttcaatacatgcag
gcttttaattccgtagcaaatggaggttatttaataacaccacatgtaatgagggaaata
agtcatgtagagaataatagacaggttgtagataaagagtatagcgattataataagaaa
aggattttagatgaaagcatgacagccaccttaagaggatatcttgaaaaggtagtctca
gaaggtggaggtaaaaaagcttttatagatggatatcatatcgggggaaaaacaggtaca
gctcaaaagccaaatcctaatggaggaggatatgagcacggaaagtatatagcttcattt
gttggaatggcgcctgcaagtgatcctaaaattacagtaatggtctcgatagatgagccg
gatccatcaaattattatgcaggtcaaatatctgcgcctgtaggtcagaaggtttttaat
gatatatttaactatctaggaataaagcctgatacatcaagttctgatgctgccaagagt
atgctaaaagatgtagttattccgaatatacgtggtatgaaaaaggaagatgctataaaa
acgcttaaaaatcttaatatagatgcggatgttgacggtaatggggaatatgtaagcaat
acaactcctattccaggcataacagtaaaagaaggaacaaaagttgtactttacacagga
gacagtcctaattataataataatgatgttatagttccaaatttaactggatatagtaaa
aaagaagcagaagaaacattaaaaagtcttgggcttgattttaaaatttcaggagatggt
gttgttgaatcgcaaagtattgatgctggtaaacaggtcaataagggtacggttttaaca
cttaaacttgaagagaatatgagcgagtga
DBGET
integrated database retrieval system
