Clostridium acetobutylicum ATCC 824: CA_C2262
Help
Entry
CA_C2262 CDS
T00056
Symbol
addA
Name
(GenBank) ATP-dependent exonuclease (exonuclease V) synthesis protein AddA (helicase and exonuclease domains)
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
cac
Clostridium acetobutylicum ATCC 824
Brite
KEGG Orthology (KO) [BR:
cac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cac03400
]
CA_C2262 (addA)
Enzymes [BR:
cac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CA_C2262 (addA)
DNA repair and recombination proteins [BR:
cac03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
CA_C2262 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_11
ResIII
DEAD
AAA_30
SF3a60_bindingd
AAA_12
DUF2059
T2SSE
Motif
Other DBs
NCBI-ProteinID:
AAK80219
UniProt:
Q97GV3
LinkDB
All DBs
Position
complement(2360780..2364538)
Genome browser
AA seq
1252 aa
AA seq
DB search
MNVGKTNWTEEQKEAIDTRNCNLLVAAAAGSGKTAVLVERIVKIITNEENPVDIDRLLVV
TFTNAAASEMRERIGDAIVNKLCENPNSRVIQKQLALIGKSKITTIHSFCLDVIKNNFHM
LDLDPDFRVGDETEIILLKNETLEELFEDKYLQAEYTSKGINKNNNSIEFLKLVESYCGN
KNDQVLFNMVMNLYNFSMSNPEPYKWLKKAAERFNVDDDFEFGDSLWAEVLMKNIQIQLL
GMKGQLIESINIINSCASIESYRENLEVELSMLEKLIVASNNYEKLYEELKNVQFKTLKR
CPKDADKEKQKLVRDLRDGVKKSLSKISEDILSQNSEEIKEEFKVLYPLMKTLSELVIEF
DIRYKDKKKKRGIIDFNDFEHMCLSILTKSDESGNIVPSETALKIREKYEEILIDEYQDS
NMVQEVILSTISRKDTENPNLFMVGDVKQSIYRFRQANPGIFLEKYNSYKENKDEKNRKV
LLYKNFRSRKEVLDSVNFVFKQIMSVNIGELDYDDNEKLNLGANYEEIEENLISHSAELN
IIEKSEDNTEIKENNEDEESVDNIMLEARLIGRRIIELKENFKVLDKNTNVYRKAEFKDI
VILLRSTKGWANVFSDELKNMGIPVFADANSGYFDAPEVKTMLSLLQVIDNPRQDIPMAA
VLKSPVGGFSVEDLIDIKVIEGDTFYDKLKVAADIGDDEFSVRIRTFLNRLYRWRKESLY
TPIDEFIWYLYTDTGYYGYVGAVSGGIQRQANLKMLFQRAKIYSETSYKGLFNFINFINK
LKLTSGDMGSAKILGENENVVRIMSIHKSKGLEFPIVFVGGLGKNFNLMDMNNPVLFHNY
LGFGPEYVDYKKRISHKTLAKEAIKNRIRIETLSEEMRILYVAFTRAKEKLIMVGSVSDI
KRSVFKWAVNLRSNQNKISEDYVLKSKSFLDWIASAVIRHKDAENLRDIMDTSKENIDNL
VCDPSSWRVNVLSRNDVLSFNQLLLEEEKNINEKLTQFYKRLKEIRSSNYESVYIEEIKS
RLEFKYRYEKAAELPSLLSVTELKRNINEDNDEYATKIFTPSLVKKPLFLEEVKKMSPSE
RGTAVHSVMQHLDFSSISCDMSIKNIRHQIDDMVFRRILTEKQAESVNINRILKFFQSPI
GSRVIKAEKVYREFPFQIRVKSTEIYNDLPKIYDDENIIVQGIVDLFFKENDEIVLLDYK
NDYINDENLNETVKKYTYQINYYKRALEIVTGLKVKEKYLYLFYTGDTIKIE
NT seq
3759 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtggggaagactaattggacagaagagcaaaaggaagctatagatactagaaac
tgtaatcttcttgtagcagctgcagctgggtcaggaaaaactgctgttcttgttgagagg
atagtaaaaataataacaaatgaggaaaatccagttgatatagataggcttttagtagtt
acatttactaatgcagcagcatctgagatgagggagagaataggggatgcaatagtaaat
aagctttgtgaaaacccaaactctagggttattcaaaaacagctcgccttaattggaaaa
tctaaaattactacaatacattcattttgcttagatgttataaaaaataactttcacatg
cttgatttagatccggattttagagttggagatgaaacggaaattattcttcttaagaac
gagactttagaggagctttttgaggataagtaccttcaggcggaatatacatctaaggga
ataaataaaaataataacagtatagaatttttaaaacttgtagaaagttattgtggcaat
aaaaatgatcaagttctttttaatatggtaatgaatctttataatttttcaatgagtaat
cctgagccgtataaatggctaaaaaaagcagcagaaagatttaatgtagatgatgacttt
gagtttggagattccctttgggcagaggttttaatgaaaaacatacaaatacagttactt
ggaatgaaagggcagcttatagagtcaataaacataataaattcatgtgcatccattgaa
agttatagagaaaacttagaagtagagctttcaatgcttgaaaaattgattgtagcttct
aataattacgaaaagttatatgaggaacttaaaaatgttcaatttaagactttaaaaaga
tgccctaaggatgctgataaggaaaagcagaagcttgtacgtgacctaagagatggtgtt
aaaaaaagtttatctaaaataagtgaagatatactttcacaaaatagtgaggagataaaa
gaggaatttaaagttctttatcctcttatgaaaactttaagtgaacttgtaatagaattt
gatattagatataaagataaaaagaaaaaaagaggtataattgattttaatgattttgaa
catatgtgtctttcaatactcacaaaaagtgatgaaagtggtaatattgtaccttctgaa
actgcattgaaaataagagaaaaatatgaggaaatattaatagacgaatatcaggacagc
aatatggttcaggaggttatattaagtactatttctagaaaggatacggaaaatcccaat
ttatttatggttggagacgtaaagcaaagtatatataggtttaggcaggctaatccaggt
attttcctagaaaagtacaatagctataaggaaaataaagatgagaagaatagaaaagta
cttttatataagaattttagaagtagaaaagaagttttggactcagtaaactttgttttt
aagcaaataatgtctgttaatattggagaacttgattatgacgataacgagaaattgaat
ttaggtgcaaattatgaagaaatagaggaaaatttaatttctcactctgcagagctaaac
ataatagaaaaaagtgaagataacactgaaataaaagagaacaatgaggatgaggaaagc
gtagataacattatgcttgaggcaagacttattggcagaagaattatagagcttaaggag
aatttcaaggtacttgataaaaatacaaacgtttatagaaaagcagagtttaaggacatt
gtaatattattaagatccacaaagggatgggcaaatgttttttctgatgagcttaaaaac
atggggataccggtttttgcagatgccaattcaggatattttgatgctccagaggttaaa
actatgttatcactgcttcaagtaattgacaatccaagacaggatatacctatggcagca
gttttaaaatcacctgtagggggattttcagtagaggatttaatagatataaaagttatt
gaaggagacaccttttatgataagcttaaagtggcagcagatattggagatgatgagttt
tcagtaaggataaggacatttcttaatagactttataggtggagaaaagaatctttatat
acgcctatagatgaatttatatggtatctttatacggatacaggatattatggctatgtt
ggggctgttagcggcggaattcagcgtcaagcaaatttgaaaatgttatttcaaagggct
aagatttatagtgaaactagctacaagggattgtttaattttataaattttataaataag
cttaagcttactagtggtgatatgggaagtgcaaaaattttaggcgagaatgaaaatgta
gttagaataatgagtatacacaaaagtaagggacttgaatttcctatagtttttgtagga
ggattagggaaaaactttaatctcatggatatgaataatccagttctttttcacaattat
ctcgggtttggaccagaatatgtagattataaaaaaagaatttcgcacaaaacacttgca
aaggaggcaataaaaaacagaataagaattgaaacactttcggaagaaatgagaatattg
tatgttgcttttacaagggcaaaagagaaacttataatggtaggctctgttagcgacata
aagaggtcggtttttaaatgggctgtgaatcttagaagtaatcaaaataaaatttcggag
gattatgtacttaaaagtaaaagctttttagattggatagctagtgctgttataagacat
aaggatgcagaaaatctaagagatattatggacacttctaaagaaaatatagacaattta
gtttgtgatccttctagttggcgagtaaatgttttaagtagaaatgatgttttaagtttt
aatcagttattattagaagaagaaaaaaacattaatgaaaaactaacgcaattttataaa
agactaaaagaaataagaagttcaaactatgaaagtgtttatatagaagaaataaaaagt
aggcttgaatttaagtatcgttatgaaaaagctgcagaactgccatcactgctttcagta
acagaacttaaaagaaatataaatgaagataatgatgagtatgctactaagatttttacg
ccttctcttgtaaaaaagcctctttttcttgaggaagttaaaaagatgtctccatcagaa
aggggaactgcagtacattcagtaatgcagcacttagattttagtagtataagttgtgac
atgagtataaaaaatataagacatcaaatagacgatatggtttttagaaggattttaaca
gagaagcaagctgaaagtgtaaatataaatagaatcttgaaattttttcaaagtccaata
ggcagtagagttattaaggctgaaaaagtttatagagaatttccttttcaaatacgtgtt
aagagtacagaaatatataatgatttacctaaaatatatgatgatgaaaatataattgtg
cagggaattgtagatttgttttttaaggaaaatgatgaaatagtgcttttagattataaa
aatgactatataaatgatgaaaatttaaatgaaacagttaaaaaatatacttatcaaatt
aattattataaaagagctcttgaaattgtaacaggattaaaggtaaaagaaaaatatctt
tatttgttttatacaggagatactattaaaatagagtaa
DBGET
integrated database retrieval system
